Gene : Lus10011154.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Genomic Order:  65
Name:  ? Lus10011154.g Secondary Identifier:  ? PAC:23167549
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRPSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10011154.g 0.5kb upstream 0.5kb upstream 2853 true scaffold1558: 342637-345489 Linum usitatissimum
Lus10011154.g 0.5kb upstream 0.5kb upstream 500 false scaffold1558: 342637-343136 Linum usitatissimum
Lus10011154.g 0.5kb downstream 0.5kb downstream 2853 true scaffold1558: 343137-345989 Linum usitatissimum
Lus10011154.g 0.5kb downstream 0.5kb downstream 500 false scaffold1558: 345490-345989 Linum usitatissimum
Lus10011154.g 1.0kb upstream 1.0kb upstream 3353 true scaffold1558: 342137-345489 Linum usitatissimum
Lus10011154.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1558: 342137-343136 Linum usitatissimum
Lus10011154.g 1.0kb downstream 1.0kb downstream 3353 true scaffold1558: 343137-346489 Linum usitatissimum
Lus10011154.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1558: 345490-346489 Linum usitatissimum
Lus10011154.g 2.0kb upstream 2.0kb upstream 4353 true scaffold1558: 341137-345489 Linum usitatissimum
Lus10011154.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1558: 341137-343136 Linum usitatissimum
Lus10011154.g 2.0kb downstream 2.0kb downstream 4353 true scaffold1558: 343137-347489 Linum usitatissimum
Lus10011154.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1558: 345490-347489 Linum usitatissimum
Lus10011154.g 5.0kb upstream 5.0kb upstream 7353 true scaffold1558: 338137-345489 Linum usitatissimum
Lus10011154.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1558: 338137-343136 Linum usitatissimum
Lus10011154.g 5.0kb downstream 5.0kb downstream 7353 true scaffold1558: 343137-350489 Linum usitatissimum
Lus10011154.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1558: 345490-350489 Linum usitatissimum
Lus10011154.g 10.0kb upstream 10.0kb upstream 12353 true scaffold1558: 333137-345489 Linum usitatissimum
Lus10011154.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1558: 333137-343136 Linum usitatissimum
Lus10011154.g 10.0kb downstream 10.0kb downstream 12353 true scaffold1558: 343137-355489 Linum usitatissimum
Lus10011154.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1558: 345490-355489 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122431134 5262 Malpighiales View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain