Gene : Lus10014073.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  60
Name:  ? Lus10014073.g Secondary Identifier:  ? PAC:23156796
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10014073.g 0.5kb upstream 0.5kb upstream 2134 true scaffold1247: 277629-279762 Linum usitatissimum
Lus10014073.g 0.5kb upstream 0.5kb upstream 500 false scaffold1247: 277629-278128 Linum usitatissimum
Lus10014073.g 0.5kb downstream 0.5kb downstream 2134 true scaffold1247: 278129-280262 Linum usitatissimum
Lus10014073.g 0.5kb downstream 0.5kb downstream 500 false scaffold1247: 279763-280262 Linum usitatissimum
Lus10014073.g 1.0kb upstream 1.0kb upstream 2634 true scaffold1247: 277129-279762 Linum usitatissimum
Lus10014073.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1247: 277129-278128 Linum usitatissimum
Lus10014073.g 1.0kb downstream 1.0kb downstream 2634 true scaffold1247: 278129-280762 Linum usitatissimum
Lus10014073.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1247: 279763-280762 Linum usitatissimum
Lus10014073.g 2.0kb upstream 2.0kb upstream 3634 true scaffold1247: 276129-279762 Linum usitatissimum
Lus10014073.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1247: 276129-278128 Linum usitatissimum
Lus10014073.g 2.0kb downstream 2.0kb downstream 3634 true scaffold1247: 278129-281762 Linum usitatissimum
Lus10014073.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1247: 279763-281762 Linum usitatissimum
Lus10014073.g 5.0kb upstream 5.0kb upstream 6634 true scaffold1247: 273129-279762 Linum usitatissimum
Lus10014073.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1247: 273129-278128 Linum usitatissimum
Lus10014073.g 5.0kb downstream 5.0kb downstream 6634 true scaffold1247: 278129-284762 Linum usitatissimum
Lus10014073.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1247: 279763-284762 Linum usitatissimum
Lus10014073.g 10.0kb upstream 10.0kb upstream 11634 true scaffold1247: 268129-279762 Linum usitatissimum
Lus10014073.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1247: 268129-278128 Linum usitatissimum
Lus10014073.g 10.0kb downstream 10.0kb downstream 11634 true scaffold1247: 278129-289762 Linum usitatissimum
Lus10014073.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1247: 279763-289762 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427012 5262 Malpighiales View MSA
124246737 5268 Malvidae View MSA
124065727 5270 Rosid View MSA
123740066 5271 Pentapetalae View MSA
122793707 5272 Eudicot View MSA
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain