Gene : Lus10009138.g L. usitatissimum v1.0
Defline:  (1 of 18) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  35
Name:  ? Lus10009138.g Secondary Identifier:  ? PAC:23150062
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5120 Linum usitatissimum pathologic  
Lusitatissimum PWY-5910 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009138.g 0.5kb upstream 0.5kb upstream 2361 true scaffold1536: 183514-185874 Linum usitatissimum
Lus10009138.g 0.5kb upstream 0.5kb upstream 500 false scaffold1536: 185375-185874 Linum usitatissimum
Lus10009138.g 0.5kb downstream 0.5kb downstream 2361 true scaffold1536: 183014-185374 Linum usitatissimum
Lus10009138.g 0.5kb downstream 0.5kb downstream 500 false scaffold1536: 183014-183513 Linum usitatissimum
Lus10009138.g 1.0kb upstream 1.0kb upstream 2861 true scaffold1536: 183514-186374 Linum usitatissimum
Lus10009138.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1536: 185375-186374 Linum usitatissimum
Lus10009138.g 1.0kb downstream 1.0kb downstream 2861 true scaffold1536: 182514-185374 Linum usitatissimum
Lus10009138.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1536: 182514-183513 Linum usitatissimum
Lus10009138.g 2.0kb upstream 2.0kb upstream 3861 true scaffold1536: 183514-187374 Linum usitatissimum
Lus10009138.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1536: 185375-187374 Linum usitatissimum
Lus10009138.g 2.0kb downstream 2.0kb downstream 3861 true scaffold1536: 181514-185374 Linum usitatissimum
Lus10009138.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1536: 181514-183513 Linum usitatissimum
Lus10009138.g 5.0kb upstream 5.0kb upstream 6861 true scaffold1536: 183514-190374 Linum usitatissimum
Lus10009138.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1536: 185375-190374 Linum usitatissimum
Lus10009138.g 5.0kb downstream 5.0kb downstream 6861 true scaffold1536: 178514-185374 Linum usitatissimum
Lus10009138.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1536: 178514-183513 Linum usitatissimum
Lus10009138.g 10.0kb upstream 10.0kb upstream 11861 true scaffold1536: 183514-195374 Linum usitatissimum
Lus10009138.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1536: 185375-195374 Linum usitatissimum
Lus10009138.g 10.0kb downstream 10.0kb downstream 11861 true scaffold1536: 173514-185374 Linum usitatissimum
Lus10009138.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1536: 173514-183513 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122424794 5262 Malpighiales View MSA
124256738 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain