Gene : Lus10031128.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00456//PF02780 - Transketolase, thiamine diphosphate binding domain (Transketolase_N) // Transketolase, C-terminal domain (Transketolase_C) Genomic Order:  24
Name:  ? Lus10031128.g Secondary Identifier:  ? PAC:23151087
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CALVIN-PWY Linum usitatissimum pathologic  
Lusitatissimum NONOXIPENT-PWY Linum usitatissimum pathologic  
Lusitatissimum PENTOSE-P-PWY Linum usitatissimum pathologic  
Lusitatissimum PHOTOALL-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-5723 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10031128.g 0.5kb upstream 0.5kb upstream 3367 true scaffold977: 119847-123213 Linum usitatissimum
Lus10031128.g 0.5kb upstream 0.5kb upstream 500 false scaffold977: 122714-123213 Linum usitatissimum
Lus10031128.g 0.5kb downstream 0.5kb downstream 3367 true scaffold977: 119347-122713 Linum usitatissimum
Lus10031128.g 0.5kb downstream 0.5kb downstream 500 false scaffold977: 119347-119846 Linum usitatissimum
Lus10031128.g 1.0kb upstream 1.0kb upstream 3867 true scaffold977: 119847-123713 Linum usitatissimum
Lus10031128.g 1.0kb upstream 1.0kb upstream 1000 false scaffold977: 122714-123713 Linum usitatissimum
Lus10031128.g 1.0kb downstream 1.0kb downstream 3867 true scaffold977: 118847-122713 Linum usitatissimum
Lus10031128.g 1.0kb downstream 1.0kb downstream 1000 false scaffold977: 118847-119846 Linum usitatissimum
Lus10031128.g 2.0kb upstream 2.0kb upstream 4867 true scaffold977: 119847-124713 Linum usitatissimum
Lus10031128.g 2.0kb upstream 2.0kb upstream 2000 false scaffold977: 122714-124713 Linum usitatissimum
Lus10031128.g 2.0kb downstream 2.0kb downstream 4867 true scaffold977: 117847-122713 Linum usitatissimum
Lus10031128.g 2.0kb downstream 2.0kb downstream 2000 false scaffold977: 117847-119846 Linum usitatissimum
Lus10031128.g 5.0kb upstream 5.0kb upstream 7867 true scaffold977: 119847-127713 Linum usitatissimum
Lus10031128.g 5.0kb upstream 5.0kb upstream 5000 false scaffold977: 122714-127713 Linum usitatissimum
Lus10031128.g 5.0kb downstream 5.0kb downstream 7867 true scaffold977: 114847-122713 Linum usitatissimum
Lus10031128.g 5.0kb downstream 5.0kb downstream 5000 false scaffold977: 114847-119846 Linum usitatissimum
Lus10031128.g 10.0kb upstream 10.0kb upstream 12867 true scaffold977: 119847-132713 Linum usitatissimum
Lus10031128.g 10.0kb upstream 10.0kb upstream 10000 false scaffold977: 122714-132713 Linum usitatissimum
Lus10031128.g 10.0kb downstream 10.0kb downstream 12867 true scaffold977: 109847-122713 Linum usitatissimum
Lus10031128.g 10.0kb downstream 10.0kb downstream 10000 false scaffold977: 109847-119846 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027550 5273 Angiosperm View MSA
122424159 5262 Malpighiales Singleton cluster - no MSA
124251132 5268 Malvidae View MSA
123952572 5270 Rosid View MSA
123530299 5271 Pentapetalae View MSA
122565265 5272 Eudicot View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain