Gene : Lus10039629.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  139
Name:  ? Lus10039629.g Secondary Identifier:  ? PAC:23165214
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-2161 Linum usitatissimum pathologic  
Lusitatissimum PWY-3841 Linum usitatissimum pathologic  
Lusitatissimum SER-GLYSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10039629.g 0.5kb upstream 0.5kb upstream 6960 true scaffold15: 852336-859295 Linum usitatissimum
Lus10039629.g 0.5kb upstream 0.5kb upstream 500 false scaffold15: 852336-852835 Linum usitatissimum
Lus10039629.g 0.5kb downstream 0.5kb downstream 6960 true scaffold15: 852836-859795 Linum usitatissimum
Lus10039629.g 0.5kb downstream 0.5kb downstream 500 false scaffold15: 859296-859795 Linum usitatissimum
Lus10039629.g 1.0kb upstream 1.0kb upstream 7460 true scaffold15: 851836-859295 Linum usitatissimum
Lus10039629.g 1.0kb upstream 1.0kb upstream 1000 false scaffold15: 851836-852835 Linum usitatissimum
Lus10039629.g 1.0kb downstream 1.0kb downstream 7460 true scaffold15: 852836-860295 Linum usitatissimum
Lus10039629.g 1.0kb downstream 1.0kb downstream 1000 false scaffold15: 859296-860295 Linum usitatissimum
Lus10039629.g 2.0kb upstream 2.0kb upstream 8460 true scaffold15: 850836-859295 Linum usitatissimum
Lus10039629.g 2.0kb upstream 2.0kb upstream 2000 false scaffold15: 850836-852835 Linum usitatissimum
Lus10039629.g 2.0kb downstream 2.0kb downstream 8460 true scaffold15: 852836-861295 Linum usitatissimum
Lus10039629.g 2.0kb downstream 2.0kb downstream 2000 false scaffold15: 859296-861295 Linum usitatissimum
Lus10039629.g 5.0kb upstream 5.0kb upstream 11460 true scaffold15: 847836-859295 Linum usitatissimum
Lus10039629.g 5.0kb upstream 5.0kb upstream 5000 false scaffold15: 847836-852835 Linum usitatissimum
Lus10039629.g 5.0kb downstream 5.0kb downstream 11460 true scaffold15: 852836-864295 Linum usitatissimum
Lus10039629.g 5.0kb downstream 5.0kb downstream 5000 false scaffold15: 859296-864295 Linum usitatissimum
Lus10039629.g 10.0kb upstream 10.0kb upstream 16460 true scaffold15: 842836-859295 Linum usitatissimum
Lus10039629.g 10.0kb upstream 10.0kb upstream 10000 false scaffold15: 842836-852835 Linum usitatissimum
Lus10039629.g 10.0kb downstream 10.0kb downstream 16460 true scaffold15: 852836-869295 Linum usitatissimum
Lus10039629.g 10.0kb downstream 10.0kb downstream 10000 false scaffold15: 859296-869295 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451530 5262 Malpighiales View MSA
124238878 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain