Gene : Lus10021954.g L. usitatissimum v1.0

Defline:  (1 of 2) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase Genomic Order:  109
Name:  ? Lus10021954.g Secondary Identifier:  ? PAC:23157966

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10021954.g 0.5kb upstream 0.5kb upstream 3816 true scaffold164: 733766-737581 Linum usitatissimum
Lus10021954.g 0.5kb upstream 0.5kb upstream 500 false scaffold164: 733766-734265 Linum usitatissimum
Lus10021954.g 0.5kb downstream 0.5kb downstream 3816 true scaffold164: 734266-738081 Linum usitatissimum
Lus10021954.g 0.5kb downstream 0.5kb downstream 500 false scaffold164: 737582-738081 Linum usitatissimum
Lus10021954.g 1.0kb upstream 1.0kb upstream 4316 true scaffold164: 733266-737581 Linum usitatissimum
Lus10021954.g 1.0kb upstream 1.0kb upstream 1000 false scaffold164: 733266-734265 Linum usitatissimum
Lus10021954.g 1.0kb downstream 1.0kb downstream 4316 true scaffold164: 734266-738581 Linum usitatissimum
Lus10021954.g 1.0kb downstream 1.0kb downstream 1000 false scaffold164: 737582-738581 Linum usitatissimum
Lus10021954.g 2.0kb upstream 2.0kb upstream 5316 true scaffold164: 732266-737581 Linum usitatissimum
Lus10021954.g 2.0kb upstream 2.0kb upstream 2000 false scaffold164: 732266-734265 Linum usitatissimum
Lus10021954.g 2.0kb downstream 2.0kb downstream 5316 true scaffold164: 734266-739581 Linum usitatissimum
Lus10021954.g 2.0kb downstream 2.0kb downstream 2000 false scaffold164: 737582-739581 Linum usitatissimum
Lus10021954.g 5.0kb upstream 5.0kb upstream 8316 true scaffold164: 729266-737581 Linum usitatissimum
Lus10021954.g 5.0kb upstream 5.0kb upstream 5000 false scaffold164: 729266-734265 Linum usitatissimum
Lus10021954.g 5.0kb downstream 5.0kb downstream 8316 true scaffold164: 734266-742581 Linum usitatissimum
Lus10021954.g 5.0kb downstream 5.0kb downstream 5000 false scaffold164: 737582-742581 Linum usitatissimum
Lus10021954.g 10.0kb upstream 10.0kb upstream 13316 true scaffold164: 724266-737581 Linum usitatissimum
Lus10021954.g 10.0kb upstream 10.0kb upstream 10000 false scaffold164: 724266-734265 Linum usitatissimum
Lus10021954.g 10.0kb downstream 10.0kb downstream 13316 true scaffold164: 734266-747581 Linum usitatissimum
Lus10021954.g 10.0kb downstream 10.0kb downstream 10000 false scaffold164: 737582-747581 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449818 5262 Malpighiales View MSA
124254063 5268 Malvidae View MSA
124063927 5270 Rosid View MSA
123743659 5271 Pentapetalae View MSA
122789603 5272 Eudicot View MSA
122049733 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain