Gene : Lus10023947.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR23063:SF2 - PROTEIN ACL-5, ISOFORM A Genomic Order:  133
Name:  ? Lus10023947.g Secondary Identifier:  ? PAC:23160652
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY0-1319 Linum usitatissimum pathologic  
Lusitatissimum PWY4FS-7 Linum usitatissimum pathologic  
Lusitatissimum PWY-7411 Linum usitatissimum pathologic  
Lusitatissimum TRIGLSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10023947.g 0.5kb upstream 0.5kb upstream 2905 true scaffold177: 646142-649046 Linum usitatissimum
Lus10023947.g 0.5kb upstream 0.5kb upstream 500 false scaffold177: 648547-649046 Linum usitatissimum
Lus10023947.g 0.5kb downstream 0.5kb downstream 2905 true scaffold177: 645642-648546 Linum usitatissimum
Lus10023947.g 0.5kb downstream 0.5kb downstream 500 false scaffold177: 645642-646141 Linum usitatissimum
Lus10023947.g 1.0kb upstream 1.0kb upstream 3405 true scaffold177: 646142-649546 Linum usitatissimum
Lus10023947.g 1.0kb upstream 1.0kb upstream 1000 false scaffold177: 648547-649546 Linum usitatissimum
Lus10023947.g 1.0kb downstream 1.0kb downstream 3405 true scaffold177: 645142-648546 Linum usitatissimum
Lus10023947.g 1.0kb downstream 1.0kb downstream 1000 false scaffold177: 645142-646141 Linum usitatissimum
Lus10023947.g 2.0kb upstream 2.0kb upstream 4405 true scaffold177: 646142-650546 Linum usitatissimum
Lus10023947.g 2.0kb upstream 2.0kb upstream 2000 false scaffold177: 648547-650546 Linum usitatissimum
Lus10023947.g 2.0kb downstream 2.0kb downstream 4405 true scaffold177: 644142-648546 Linum usitatissimum
Lus10023947.g 2.0kb downstream 2.0kb downstream 2000 false scaffold177: 644142-646141 Linum usitatissimum
Lus10023947.g 5.0kb upstream 5.0kb upstream 7405 true scaffold177: 646142-653546 Linum usitatissimum
Lus10023947.g 5.0kb upstream 5.0kb upstream 5000 false scaffold177: 648547-653546 Linum usitatissimum
Lus10023947.g 5.0kb downstream 5.0kb downstream 7405 true scaffold177: 641142-648546 Linum usitatissimum
Lus10023947.g 5.0kb downstream 5.0kb downstream 5000 false scaffold177: 641142-646141 Linum usitatissimum
Lus10023947.g 10.0kb upstream 10.0kb upstream 12405 true scaffold177: 646142-658546 Linum usitatissimum
Lus10023947.g 10.0kb upstream 10.0kb upstream 10000 false scaffold177: 648547-658546 Linum usitatissimum
Lus10023947.g 10.0kb downstream 10.0kb downstream 12405 true scaffold177: 636142-648546 Linum usitatissimum
Lus10023947.g 10.0kb downstream 10.0kb downstream 10000 false scaffold177: 636142-646141 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459062 5262 Malpighiales View MSA
124240700 5268 Malvidae View MSA
124065139 5270 Rosid View MSA
123751222 5271 Pentapetalae View MSA
122796143 5272 Eudicot View MSA
122045469 5273 Angiosperm View MSA
121344945 5274 Embryophyte View MSA
123427569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain