Gene : Lus10017109.g L. usitatissimum v1.0
Defline:  (1 of 79) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  49
Name:  ? Lus10017109.g Secondary Identifier:  ? PAC:23167429
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10017109.g 0.5kb upstream 0.5kb upstream 3755 true scaffold216: 304099-307853 Linum usitatissimum
Lus10017109.g 0.5kb upstream 0.5kb upstream 500 false scaffold216: 304099-304598 Linum usitatissimum
Lus10017109.g 0.5kb downstream 0.5kb downstream 3755 true scaffold216: 304599-308353 Linum usitatissimum
Lus10017109.g 0.5kb downstream 0.5kb downstream 500 false scaffold216: 307854-308353 Linum usitatissimum
Lus10017109.g 1.0kb upstream 1.0kb upstream 4255 true scaffold216: 303599-307853 Linum usitatissimum
Lus10017109.g 1.0kb upstream 1.0kb upstream 1000 false scaffold216: 303599-304598 Linum usitatissimum
Lus10017109.g 1.0kb downstream 1.0kb downstream 4255 true scaffold216: 304599-308853 Linum usitatissimum
Lus10017109.g 1.0kb downstream 1.0kb downstream 1000 false scaffold216: 307854-308853 Linum usitatissimum
Lus10017109.g 2.0kb upstream 2.0kb upstream 5255 true scaffold216: 302599-307853 Linum usitatissimum
Lus10017109.g 2.0kb upstream 2.0kb upstream 2000 false scaffold216: 302599-304598 Linum usitatissimum
Lus10017109.g 2.0kb downstream 2.0kb downstream 5255 true scaffold216: 304599-309853 Linum usitatissimum
Lus10017109.g 2.0kb downstream 2.0kb downstream 2000 false scaffold216: 307854-309853 Linum usitatissimum
Lus10017109.g 5.0kb upstream 5.0kb upstream 8255 true scaffold216: 299599-307853 Linum usitatissimum
Lus10017109.g 5.0kb upstream 5.0kb upstream 5000 false scaffold216: 299599-304598 Linum usitatissimum
Lus10017109.g 5.0kb downstream 5.0kb downstream 8255 true scaffold216: 304599-312853 Linum usitatissimum
Lus10017109.g 5.0kb downstream 5.0kb downstream 5000 false scaffold216: 307854-312853 Linum usitatissimum
Lus10017109.g 10.0kb upstream 10.0kb upstream 13255 true scaffold216: 294599-307853 Linum usitatissimum
Lus10017109.g 10.0kb upstream 10.0kb upstream 10000 false scaffold216: 294599-304598 Linum usitatissimum
Lus10017109.g 10.0kb downstream 10.0kb downstream 13255 true scaffold216: 304599-317853 Linum usitatissimum
Lus10017109.g 10.0kb downstream 10.0kb downstream 10000 false scaffold216: 307854-317853 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451982 5262 Malpighiales View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain