Gene : Lus10020034.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  94
Name:  ? Lus10020034.g Secondary Identifier:  ? PAC:23156214
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10020034.g 0.5kb upstream 0.5kb upstream 2098 true scaffold23: 513797-515894 Linum usitatissimum
Lus10020034.g 0.5kb upstream 0.5kb upstream 500 false scaffold23: 513797-514296 Linum usitatissimum
Lus10020034.g 0.5kb downstream 0.5kb downstream 2098 true scaffold23: 514297-516394 Linum usitatissimum
Lus10020034.g 0.5kb downstream 0.5kb downstream 500 false scaffold23: 515895-516394 Linum usitatissimum
Lus10020034.g 1.0kb upstream 1.0kb upstream 2598 true scaffold23: 513297-515894 Linum usitatissimum
Lus10020034.g 1.0kb upstream 1.0kb upstream 1000 false scaffold23: 513297-514296 Linum usitatissimum
Lus10020034.g 1.0kb downstream 1.0kb downstream 2598 true scaffold23: 514297-516894 Linum usitatissimum
Lus10020034.g 1.0kb downstream 1.0kb downstream 1000 false scaffold23: 515895-516894 Linum usitatissimum
Lus10020034.g 2.0kb upstream 2.0kb upstream 3598 true scaffold23: 512297-515894 Linum usitatissimum
Lus10020034.g 2.0kb upstream 2.0kb upstream 2000 false scaffold23: 512297-514296 Linum usitatissimum
Lus10020034.g 2.0kb downstream 2.0kb downstream 3598 true scaffold23: 514297-517894 Linum usitatissimum
Lus10020034.g 2.0kb downstream 2.0kb downstream 2000 false scaffold23: 515895-517894 Linum usitatissimum
Lus10020034.g 5.0kb upstream 5.0kb upstream 6598 true scaffold23: 509297-515894 Linum usitatissimum
Lus10020034.g 5.0kb upstream 5.0kb upstream 5000 false scaffold23: 509297-514296 Linum usitatissimum
Lus10020034.g 5.0kb downstream 5.0kb downstream 6598 true scaffold23: 514297-520894 Linum usitatissimum
Lus10020034.g 5.0kb downstream 5.0kb downstream 5000 false scaffold23: 515895-520894 Linum usitatissimum
Lus10020034.g 10.0kb upstream 10.0kb upstream 11598 true scaffold23: 504297-515894 Linum usitatissimum
Lus10020034.g 10.0kb upstream 10.0kb upstream 10000 false scaffold23: 504297-514296 Linum usitatissimum
Lus10020034.g 10.0kb downstream 10.0kb downstream 11598 true scaffold23: 514297-525894 Linum usitatissimum
Lus10020034.g 10.0kb downstream 10.0kb downstream 10000 false scaffold23: 515895-525894 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121557918 5273 Angiosperm Singleton cluster - no MSA
122417784 5262 Malpighiales Singleton cluster - no MSA
124210462 5268 Malvidae Singleton cluster - no MSA
123928680 5270 Rosid Singleton cluster - no MSA
123508252 5271 Pentapetalae Singleton cluster - no MSA
122543332 5272 Eudicot Singleton cluster - no MSA
120830492 5274 Embryophyte Singleton cluster - no MSA
122871817 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain