Gene : Lus10005564.g L. usitatissimum v1.0

Defline:  (1 of 2) 2.6.1.9 - Histidinol-phosphate transaminase / Imidazolylacetolphosphate aminotransferase Genomic Order:  28
Name:  ? Lus10005564.g Secondary Identifier:  ? PAC:23139620

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum HISTSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10005564.g 0.5kb upstream 0.5kb upstream 2712 true scaffold2324: 105423-108134 Linum usitatissimum
Lus10005564.g 0.5kb upstream 0.5kb upstream 500 false scaffold2324: 107635-108134 Linum usitatissimum
Lus10005564.g 0.5kb downstream 0.5kb downstream 2712 true scaffold2324: 104923-107634 Linum usitatissimum
Lus10005564.g 0.5kb downstream 0.5kb downstream 500 false scaffold2324: 104923-105422 Linum usitatissimum
Lus10005564.g 1.0kb upstream 1.0kb upstream 3212 true scaffold2324: 105423-108634 Linum usitatissimum
Lus10005564.g 1.0kb upstream 1.0kb upstream 1000 false scaffold2324: 107635-108634 Linum usitatissimum
Lus10005564.g 1.0kb downstream 1.0kb downstream 3212 true scaffold2324: 104423-107634 Linum usitatissimum
Lus10005564.g 1.0kb downstream 1.0kb downstream 1000 false scaffold2324: 104423-105422 Linum usitatissimum
Lus10005564.g 2.0kb upstream 2.0kb upstream 4212 true scaffold2324: 105423-109634 Linum usitatissimum
Lus10005564.g 2.0kb upstream 2.0kb upstream 2000 false scaffold2324: 107635-109634 Linum usitatissimum
Lus10005564.g 2.0kb downstream 2.0kb downstream 4212 true scaffold2324: 103423-107634 Linum usitatissimum
Lus10005564.g 2.0kb downstream 2.0kb downstream 2000 false scaffold2324: 103423-105422 Linum usitatissimum
Lus10005564.g 5.0kb upstream 5.0kb upstream 7212 true scaffold2324: 105423-112634 Linum usitatissimum
Lus10005564.g 5.0kb upstream 5.0kb upstream 5000 false scaffold2324: 107635-112634 Linum usitatissimum
Lus10005564.g 5.0kb downstream 5.0kb downstream 7212 true scaffold2324: 100423-107634 Linum usitatissimum
Lus10005564.g 5.0kb downstream 5.0kb downstream 5000 false scaffold2324: 100423-105422 Linum usitatissimum
Lus10005564.g 10.0kb upstream 10.0kb upstream 12212 true scaffold2324: 105423-117634 Linum usitatissimum
Lus10005564.g 10.0kb upstream 10.0kb upstream 10000 false scaffold2324: 107635-117634 Linum usitatissimum
Lus10005564.g 10.0kb downstream 10.0kb downstream 12212 true scaffold2324: 95423-107634 Linum usitatissimum
Lus10005564.g 10.0kb downstream 10.0kb downstream 10000 false scaffold2324: 95423-105422 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452566 5262 Malpighiales View MSA
124251034 5268 Malvidae View MSA
124062361 5270 Rosid View MSA
123738410 5271 Pentapetalae View MSA
122789923 5272 Eudicot View MSA
122043706 5273 Angiosperm View MSA
121344225 5274 Embryophyte View MSA
123423969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain