Gene : Lus10006943.g L. usitatissimum v1.0
Defline:  (1 of 4) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  12
Name:  ? Lus10006943.g Secondary Identifier:  ? PAC:23158100
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYOXYLATE-BYPASS Linum usitatissimum pathologic  
Lusitatissimum PWY-5464 Linum usitatissimum pathologic  
Lusitatissimum PWY-561 Linum usitatissimum pathologic  
Lusitatissimum PWY-5690 Linum usitatissimum pathologic  
Lusitatissimum PWY-6549 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10006943.g 0.5kb upstream 0.5kb upstream 5285 true scaffold253: 224627-229911 Linum usitatissimum
Lus10006943.g 0.5kb upstream 0.5kb upstream 500 false scaffold253: 229412-229911 Linum usitatissimum
Lus10006943.g 0.5kb downstream 0.5kb downstream 5285 true scaffold253: 224127-229411 Linum usitatissimum
Lus10006943.g 0.5kb downstream 0.5kb downstream 500 false scaffold253: 224127-224626 Linum usitatissimum
Lus10006943.g 1.0kb upstream 1.0kb upstream 5785 true scaffold253: 224627-230411 Linum usitatissimum
Lus10006943.g 1.0kb upstream 1.0kb upstream 1000 false scaffold253: 229412-230411 Linum usitatissimum
Lus10006943.g 1.0kb downstream 1.0kb downstream 5785 true scaffold253: 223627-229411 Linum usitatissimum
Lus10006943.g 1.0kb downstream 1.0kb downstream 1000 false scaffold253: 223627-224626 Linum usitatissimum
Lus10006943.g 2.0kb upstream 2.0kb upstream 6785 true scaffold253: 224627-231411 Linum usitatissimum
Lus10006943.g 2.0kb upstream 2.0kb upstream 2000 false scaffold253: 229412-231411 Linum usitatissimum
Lus10006943.g 2.0kb downstream 2.0kb downstream 6785 true scaffold253: 222627-229411 Linum usitatissimum
Lus10006943.g 2.0kb downstream 2.0kb downstream 2000 false scaffold253: 222627-224626 Linum usitatissimum
Lus10006943.g 5.0kb upstream 5.0kb upstream 9785 true scaffold253: 224627-234411 Linum usitatissimum
Lus10006943.g 5.0kb upstream 5.0kb upstream 5000 false scaffold253: 229412-234411 Linum usitatissimum
Lus10006943.g 5.0kb downstream 5.0kb downstream 9785 true scaffold253: 219627-229411 Linum usitatissimum
Lus10006943.g 5.0kb downstream 5.0kb downstream 5000 false scaffold253: 219627-224626 Linum usitatissimum
Lus10006943.g 10.0kb upstream 10.0kb upstream 14785 true scaffold253: 224627-239411 Linum usitatissimum
Lus10006943.g 10.0kb upstream 10.0kb upstream 10000 false scaffold253: 229412-239411 Linum usitatissimum
Lus10006943.g 10.0kb downstream 10.0kb downstream 14785 true scaffold253: 214627-229411 Linum usitatissimum
Lus10006943.g 10.0kb downstream 10.0kb downstream 10000 false scaffold253: 214627-224626 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121558151 5273 Angiosperm Singleton cluster - no MSA
122418135 5262 Malpighiales Singleton cluster - no MSA
124210764 5268 Malvidae Singleton cluster - no MSA
123928946 5270 Rosid Singleton cluster - no MSA
123508486 5271 Pentapetalae Singleton cluster - no MSA
122543565 5272 Eudicot Singleton cluster - no MSA
120830725 5274 Embryophyte Singleton cluster - no MSA
122872050 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain