Gene : Lus10027027.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  25
Name:  ? Lus10027027.g Secondary Identifier:  ? PAC:23151547
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10027027.g 0.5kb upstream 0.5kb upstream 6118 true scaffold297: 145336-151453 Linum usitatissimum
Lus10027027.g 0.5kb upstream 0.5kb upstream 500 false scaffold297: 145336-145835 Linum usitatissimum
Lus10027027.g 0.5kb downstream 0.5kb downstream 6118 true scaffold297: 145836-151953 Linum usitatissimum
Lus10027027.g 0.5kb downstream 0.5kb downstream 500 false scaffold297: 151454-151953 Linum usitatissimum
Lus10027027.g 1.0kb upstream 1.0kb upstream 6618 true scaffold297: 144836-151453 Linum usitatissimum
Lus10027027.g 1.0kb upstream 1.0kb upstream 1000 false scaffold297: 144836-145835 Linum usitatissimum
Lus10027027.g 1.0kb downstream 1.0kb downstream 6618 true scaffold297: 145836-152453 Linum usitatissimum
Lus10027027.g 1.0kb downstream 1.0kb downstream 1000 false scaffold297: 151454-152453 Linum usitatissimum
Lus10027027.g 2.0kb upstream 2.0kb upstream 7618 true scaffold297: 143836-151453 Linum usitatissimum
Lus10027027.g 2.0kb upstream 2.0kb upstream 2000 false scaffold297: 143836-145835 Linum usitatissimum
Lus10027027.g 2.0kb downstream 2.0kb downstream 7618 true scaffold297: 145836-153453 Linum usitatissimum
Lus10027027.g 2.0kb downstream 2.0kb downstream 2000 false scaffold297: 151454-153453 Linum usitatissimum
Lus10027027.g 5.0kb upstream 5.0kb upstream 10618 true scaffold297: 140836-151453 Linum usitatissimum
Lus10027027.g 5.0kb upstream 5.0kb upstream 5000 false scaffold297: 140836-145835 Linum usitatissimum
Lus10027027.g 5.0kb downstream 5.0kb downstream 10618 true scaffold297: 145836-156453 Linum usitatissimum
Lus10027027.g 5.0kb downstream 5.0kb downstream 5000 false scaffold297: 151454-156453 Linum usitatissimum
Lus10027027.g 10.0kb upstream 10.0kb upstream 15618 true scaffold297: 135836-151453 Linum usitatissimum
Lus10027027.g 10.0kb upstream 10.0kb upstream 10000 false scaffold297: 135836-145835 Linum usitatissimum
Lus10027027.g 10.0kb downstream 10.0kb downstream 15618 true scaffold297: 145836-161453 Linum usitatissimum
Lus10027027.g 10.0kb downstream 10.0kb downstream 10000 false scaffold297: 151454-161453 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450480 5262 Malpighiales View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain