Gene : Lus10028196.g L. usitatissimum v1.0
Defline:  (1 of 2) PF00289//PF02785//PF13535 - Carbamoyl-phosphate synthase L chain, N-terminal domain (CPSase_L_chain) // Biotin carboxylase C-terminal domain (Biotin_carb_C) // ATP-grasp domain (ATP-grasp_4) Genomic Order:  88
Name:  ? Lus10028196.g Secondary Identifier:  ? PAC:23166478
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY0-1264 Linum usitatissimum pathologic  
Lusitatissimum PWY-4381 Linum usitatissimum pathologic  
Lusitatissimum PWY-5156 Linum usitatissimum pathologic  
Lusitatissimum PWY-7388 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10028196.g 0.5kb upstream 0.5kb upstream 5618 true scaffold327: 466963-472580 Linum usitatissimum
Lus10028196.g 0.5kb upstream 0.5kb upstream 500 false scaffold327: 466963-467462 Linum usitatissimum
Lus10028196.g 0.5kb downstream 0.5kb downstream 5618 true scaffold327: 467463-473080 Linum usitatissimum
Lus10028196.g 0.5kb downstream 0.5kb downstream 500 false scaffold327: 472581-473080 Linum usitatissimum
Lus10028196.g 1.0kb upstream 1.0kb upstream 6118 true scaffold327: 466463-472580 Linum usitatissimum
Lus10028196.g 1.0kb upstream 1.0kb upstream 1000 false scaffold327: 466463-467462 Linum usitatissimum
Lus10028196.g 1.0kb downstream 1.0kb downstream 6118 true scaffold327: 467463-473580 Linum usitatissimum
Lus10028196.g 1.0kb downstream 1.0kb downstream 1000 false scaffold327: 472581-473580 Linum usitatissimum
Lus10028196.g 2.0kb upstream 2.0kb upstream 7118 true scaffold327: 465463-472580 Linum usitatissimum
Lus10028196.g 2.0kb upstream 2.0kb upstream 2000 false scaffold327: 465463-467462 Linum usitatissimum
Lus10028196.g 2.0kb downstream 2.0kb downstream 7118 true scaffold327: 467463-474580 Linum usitatissimum
Lus10028196.g 2.0kb downstream 2.0kb downstream 2000 false scaffold327: 472581-474580 Linum usitatissimum
Lus10028196.g 5.0kb upstream 5.0kb upstream 10118 true scaffold327: 462463-472580 Linum usitatissimum
Lus10028196.g 5.0kb upstream 5.0kb upstream 5000 false scaffold327: 462463-467462 Linum usitatissimum
Lus10028196.g 5.0kb downstream 5.0kb downstream 10118 true scaffold327: 467463-477580 Linum usitatissimum
Lus10028196.g 5.0kb downstream 5.0kb downstream 5000 false scaffold327: 472581-477580 Linum usitatissimum
Lus10028196.g 10.0kb upstream 10.0kb upstream 15118 true scaffold327: 457463-472580 Linum usitatissimum
Lus10028196.g 10.0kb upstream 10.0kb upstream 10000 false scaffold327: 457463-467462 Linum usitatissimum
Lus10028196.g 10.0kb downstream 10.0kb downstream 15118 true scaffold327: 467463-482580 Linum usitatissimum
Lus10028196.g 10.0kb downstream 10.0kb downstream 10000 false scaffold327: 472581-482580 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453887 5262 Malpighiales View MSA
124253472 5268 Malvidae View MSA
124069238 5270 Rosid View MSA
123745684 5271 Pentapetalae View MSA
122794668 5272 Eudicot View MSA
122048347 5273 Angiosperm View MSA
121348356 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain