Gene : Lus10028187.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  79
Name:  ? Lus10028187.g Secondary Identifier:  ? PAC:23166438
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10028187.g 0.5kb upstream 0.5kb upstream 7893 true scaffold327: 428155-436047 Linum usitatissimum
Lus10028187.g 0.5kb upstream 0.5kb upstream 500 false scaffold327: 428155-428654 Linum usitatissimum
Lus10028187.g 0.5kb downstream 0.5kb downstream 7893 true scaffold327: 428655-436547 Linum usitatissimum
Lus10028187.g 0.5kb downstream 0.5kb downstream 500 false scaffold327: 436048-436547 Linum usitatissimum
Lus10028187.g 1.0kb upstream 1.0kb upstream 8393 true scaffold327: 427655-436047 Linum usitatissimum
Lus10028187.g 1.0kb upstream 1.0kb upstream 1000 false scaffold327: 427655-428654 Linum usitatissimum
Lus10028187.g 1.0kb downstream 1.0kb downstream 8393 true scaffold327: 428655-437047 Linum usitatissimum
Lus10028187.g 1.0kb downstream 1.0kb downstream 1000 false scaffold327: 436048-437047 Linum usitatissimum
Lus10028187.g 2.0kb upstream 2.0kb upstream 9393 true scaffold327: 426655-436047 Linum usitatissimum
Lus10028187.g 2.0kb upstream 2.0kb upstream 2000 false scaffold327: 426655-428654 Linum usitatissimum
Lus10028187.g 2.0kb downstream 2.0kb downstream 9393 true scaffold327: 428655-438047 Linum usitatissimum
Lus10028187.g 2.0kb downstream 2.0kb downstream 2000 false scaffold327: 436048-438047 Linum usitatissimum
Lus10028187.g 5.0kb upstream 5.0kb upstream 12393 true scaffold327: 423655-436047 Linum usitatissimum
Lus10028187.g 5.0kb upstream 5.0kb upstream 5000 false scaffold327: 423655-428654 Linum usitatissimum
Lus10028187.g 5.0kb downstream 5.0kb downstream 12393 true scaffold327: 428655-441047 Linum usitatissimum
Lus10028187.g 5.0kb downstream 5.0kb downstream 5000 false scaffold327: 436048-441047 Linum usitatissimum
Lus10028187.g 10.0kb upstream 10.0kb upstream 17393 true scaffold327: 418655-436047 Linum usitatissimum
Lus10028187.g 10.0kb upstream 10.0kb upstream 10000 false scaffold327: 418655-428654 Linum usitatissimum
Lus10028187.g 10.0kb downstream 10.0kb downstream 17393 true scaffold327: 428655-446047 Linum usitatissimum
Lus10028187.g 10.0kb downstream 10.0kb downstream 10000 false scaffold327: 436048-446047 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427265 5262 Malpighiales View MSA
124251962 5268 Malvidae View MSA
124061906 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain