Gene : Lus10024057.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  49
Name:  ? Lus10024057.g Secondary Identifier:  ? PAC:23141471
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10024057.g 0.5kb upstream 0.5kb upstream 8390 true scaffold353: 267182-275571 Linum usitatissimum
Lus10024057.g 0.5kb upstream 0.5kb upstream 500 false scaffold353: 275072-275571 Linum usitatissimum
Lus10024057.g 0.5kb downstream 0.5kb downstream 8390 true scaffold353: 266682-275071 Linum usitatissimum
Lus10024057.g 0.5kb downstream 0.5kb downstream 500 false scaffold353: 266682-267181 Linum usitatissimum
Lus10024057.g 1.0kb upstream 1.0kb upstream 8890 true scaffold353: 267182-276071 Linum usitatissimum
Lus10024057.g 1.0kb upstream 1.0kb upstream 1000 false scaffold353: 275072-276071 Linum usitatissimum
Lus10024057.g 1.0kb downstream 1.0kb downstream 8890 true scaffold353: 266182-275071 Linum usitatissimum
Lus10024057.g 1.0kb downstream 1.0kb downstream 1000 false scaffold353: 266182-267181 Linum usitatissimum
Lus10024057.g 2.0kb upstream 2.0kb upstream 9890 true scaffold353: 267182-277071 Linum usitatissimum
Lus10024057.g 2.0kb upstream 2.0kb upstream 2000 false scaffold353: 275072-277071 Linum usitatissimum
Lus10024057.g 2.0kb downstream 2.0kb downstream 9890 true scaffold353: 265182-275071 Linum usitatissimum
Lus10024057.g 2.0kb downstream 2.0kb downstream 2000 false scaffold353: 265182-267181 Linum usitatissimum
Lus10024057.g 5.0kb upstream 5.0kb upstream 12890 true scaffold353: 267182-280071 Linum usitatissimum
Lus10024057.g 5.0kb upstream 5.0kb upstream 5000 false scaffold353: 275072-280071 Linum usitatissimum
Lus10024057.g 5.0kb downstream 5.0kb downstream 12890 true scaffold353: 262182-275071 Linum usitatissimum
Lus10024057.g 5.0kb downstream 5.0kb downstream 5000 false scaffold353: 262182-267181 Linum usitatissimum
Lus10024057.g 10.0kb upstream 10.0kb upstream 17890 true scaffold353: 267182-285071 Linum usitatissimum
Lus10024057.g 10.0kb upstream 10.0kb upstream 10000 false scaffold353: 275072-285071 Linum usitatissimum
Lus10024057.g 10.0kb downstream 10.0kb downstream 17890 true scaffold353: 257182-275071 Linum usitatissimum
Lus10024057.g 10.0kb downstream 10.0kb downstream 10000 false scaffold353: 257182-267181 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450998 5262 Malpighiales View MSA
124238716 5268 Malvidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain