Gene : Lus10005156.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00133//PF00234 - tRNA synthetases class I (I, L, M and V) (tRNA-synt_1) // Protease inhibitor/seed storage/LTP family (Tryp_alpha_amyl) Genomic Order:  24
Name:  ? Lus10005156.g Secondary Identifier:  ? PAC:23141911
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10005156.g 0.5kb upstream 0.5kb upstream 5178 true scaffold370: 165481-170658 Linum usitatissimum
Lus10005156.g 0.5kb upstream 0.5kb upstream 500 false scaffold370: 170159-170658 Linum usitatissimum
Lus10005156.g 0.5kb downstream 0.5kb downstream 5178 true scaffold370: 164981-170158 Linum usitatissimum
Lus10005156.g 0.5kb downstream 0.5kb downstream 500 false scaffold370: 164981-165480 Linum usitatissimum
Lus10005156.g 1.0kb upstream 1.0kb upstream 5678 true scaffold370: 165481-171158 Linum usitatissimum
Lus10005156.g 1.0kb upstream 1.0kb upstream 1000 false scaffold370: 170159-171158 Linum usitatissimum
Lus10005156.g 1.0kb downstream 1.0kb downstream 5678 true scaffold370: 164481-170158 Linum usitatissimum
Lus10005156.g 1.0kb downstream 1.0kb downstream 1000 false scaffold370: 164481-165480 Linum usitatissimum
Lus10005156.g 2.0kb upstream 2.0kb upstream 6678 true scaffold370: 165481-172158 Linum usitatissimum
Lus10005156.g 2.0kb upstream 2.0kb upstream 2000 false scaffold370: 170159-172158 Linum usitatissimum
Lus10005156.g 2.0kb downstream 2.0kb downstream 6678 true scaffold370: 163481-170158 Linum usitatissimum
Lus10005156.g 2.0kb downstream 2.0kb downstream 2000 false scaffold370: 163481-165480 Linum usitatissimum
Lus10005156.g 5.0kb upstream 5.0kb upstream 9678 true scaffold370: 165481-175158 Linum usitatissimum
Lus10005156.g 5.0kb upstream 5.0kb upstream 5000 false scaffold370: 170159-175158 Linum usitatissimum
Lus10005156.g 5.0kb downstream 5.0kb downstream 9678 true scaffold370: 160481-170158 Linum usitatissimum
Lus10005156.g 5.0kb downstream 5.0kb downstream 5000 false scaffold370: 160481-165480 Linum usitatissimum
Lus10005156.g 10.0kb upstream 10.0kb upstream 14678 true scaffold370: 165481-180158 Linum usitatissimum
Lus10005156.g 10.0kb upstream 10.0kb upstream 10000 false scaffold370: 170159-180158 Linum usitatissimum
Lus10005156.g 10.0kb downstream 10.0kb downstream 14678 true scaffold370: 155481-170158 Linum usitatissimum
Lus10005156.g 10.0kb downstream 10.0kb downstream 10000 false scaffold370: 155481-165480 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450547 5262 Malpighiales View MSA
124242853 5268 Malvidae View MSA
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain