Gene : Lus10029796.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE Genomic Order:  10
Name:  ? Lus10029796.g Secondary Identifier:  ? PAC:23159719
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum ASPARTATE-DEG1-PWY Linum usitatissimum pathologic  
Lusitatissimum ASPARTATESYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-3001 Linum usitatissimum pathologic  
Lusitatissimum PWY-7115 Linum usitatissimum pathologic  
Lusitatissimum PWY-7117 Linum usitatissimum pathologic  
Lusitatissimum THRESYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10029796.g 0.5kb upstream 0.5kb upstream 3389 true scaffold416: 41729-45117 Linum usitatissimum
Lus10029796.g 0.5kb upstream 0.5kb upstream 500 false scaffold416: 41729-42228 Linum usitatissimum
Lus10029796.g 0.5kb downstream 0.5kb downstream 3389 true scaffold416: 42229-45617 Linum usitatissimum
Lus10029796.g 0.5kb downstream 0.5kb downstream 500 false scaffold416: 45118-45617 Linum usitatissimum
Lus10029796.g 1.0kb upstream 1.0kb upstream 3889 true scaffold416: 41229-45117 Linum usitatissimum
Lus10029796.g 1.0kb upstream 1.0kb upstream 1000 false scaffold416: 41229-42228 Linum usitatissimum
Lus10029796.g 1.0kb downstream 1.0kb downstream 3889 true scaffold416: 42229-46117 Linum usitatissimum
Lus10029796.g 1.0kb downstream 1.0kb downstream 1000 false scaffold416: 45118-46117 Linum usitatissimum
Lus10029796.g 2.0kb upstream 2.0kb upstream 4889 true scaffold416: 40229-45117 Linum usitatissimum
Lus10029796.g 2.0kb upstream 2.0kb upstream 2000 false scaffold416: 40229-42228 Linum usitatissimum
Lus10029796.g 2.0kb downstream 2.0kb downstream 4889 true scaffold416: 42229-47117 Linum usitatissimum
Lus10029796.g 2.0kb downstream 2.0kb downstream 2000 false scaffold416: 45118-47117 Linum usitatissimum
Lus10029796.g 5.0kb upstream 5.0kb upstream 7889 true scaffold416: 37229-45117 Linum usitatissimum
Lus10029796.g 5.0kb upstream 5.0kb upstream 5000 false scaffold416: 37229-42228 Linum usitatissimum
Lus10029796.g 5.0kb downstream 5.0kb downstream 7889 true scaffold416: 42229-50117 Linum usitatissimum
Lus10029796.g 5.0kb downstream 5.0kb downstream 5000 false scaffold416: 45118-50117 Linum usitatissimum
Lus10029796.g 10.0kb upstream 10.0kb upstream 12889 true scaffold416: 32229-45117 Linum usitatissimum
Lus10029796.g 10.0kb upstream 10.0kb upstream 10000 false scaffold416: 32229-42228 Linum usitatissimum
Lus10029796.g 10.0kb downstream 10.0kb downstream 12889 true scaffold416: 42229-55117 Linum usitatissimum
Lus10029796.g 10.0kb downstream 10.0kb downstream 10000 false scaffold416: 45118-55117 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456383 5262 Malpighiales View MSA
124241659 5268 Malvidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain