Gene : Lus10029920.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR31642:SF40 - DUAL TRANSCRIPTION UNIT AND ALTERNATIVE SPLICING PROTEIN GLAUCE Genomic Order:  134
Name:  ? Lus10029920.g Secondary Identifier:  ? PAC:23159862
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7120 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10029920.g 0.5kb upstream 0.5kb upstream 2526 true scaffold416: 679838-682363 Linum usitatissimum
Lus10029920.g 0.5kb upstream 0.5kb upstream 500 false scaffold416: 679838-680337 Linum usitatissimum
Lus10029920.g 0.5kb downstream 0.5kb downstream 2526 true scaffold416: 680338-682863 Linum usitatissimum
Lus10029920.g 0.5kb downstream 0.5kb downstream 500 false scaffold416: 682364-682863 Linum usitatissimum
Lus10029920.g 1.0kb upstream 1.0kb upstream 3026 true scaffold416: 679338-682363 Linum usitatissimum
Lus10029920.g 1.0kb upstream 1.0kb upstream 1000 false scaffold416: 679338-680337 Linum usitatissimum
Lus10029920.g 1.0kb downstream 1.0kb downstream 3026 true scaffold416: 680338-683363 Linum usitatissimum
Lus10029920.g 1.0kb downstream 1.0kb downstream 1000 false scaffold416: 682364-683363 Linum usitatissimum
Lus10029920.g 2.0kb upstream 2.0kb upstream 4026 true scaffold416: 678338-682363 Linum usitatissimum
Lus10029920.g 2.0kb upstream 2.0kb upstream 2000 false scaffold416: 678338-680337 Linum usitatissimum
Lus10029920.g 2.0kb downstream 2.0kb downstream 4026 true scaffold416: 680338-684363 Linum usitatissimum
Lus10029920.g 2.0kb downstream 2.0kb downstream 2000 false scaffold416: 682364-684363 Linum usitatissimum
Lus10029920.g 5.0kb upstream 5.0kb upstream 7026 true scaffold416: 675338-682363 Linum usitatissimum
Lus10029920.g 5.0kb upstream 5.0kb upstream 5000 false scaffold416: 675338-680337 Linum usitatissimum
Lus10029920.g 5.0kb downstream 5.0kb downstream 7026 true scaffold416: 680338-687363 Linum usitatissimum
Lus10029920.g 5.0kb downstream 5.0kb downstream 5000 false scaffold416: 682364-687363 Linum usitatissimum
Lus10029920.g 10.0kb upstream 10.0kb upstream 12026 true scaffold416: 670338-682363 Linum usitatissimum
Lus10029920.g 10.0kb upstream 10.0kb upstream 10000 false scaffold416: 670338-680337 Linum usitatissimum
Lus10029920.g 10.0kb downstream 10.0kb downstream 12026 true scaffold416: 680338-692363 Linum usitatissimum
Lus10029920.g 10.0kb downstream 10.0kb downstream 10000 false scaffold416: 682364-692363 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457469 5262 Malpighiales View MSA
124243245 5268 Malvidae View MSA
124063642 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain