Gene : Lus10020217.g L. usitatissimum v1.0

Defline:  (1 of 2) PTHR22808 - NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING Genomic Order:  126
Name:  ? Lus10020217.g Secondary Identifier:  ? PAC:23142008

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-6829 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10020217.g 0.5kb upstream 0.5kb upstream 6961 true scaffold454: 667981-674941 Linum usitatissimum
Lus10020217.g 0.5kb upstream 0.5kb upstream 500 false scaffold454: 674442-674941 Linum usitatissimum
Lus10020217.g 0.5kb downstream 0.5kb downstream 6961 true scaffold454: 667481-674441 Linum usitatissimum
Lus10020217.g 0.5kb downstream 0.5kb downstream 500 false scaffold454: 667481-667980 Linum usitatissimum
Lus10020217.g 1.0kb upstream 1.0kb upstream 7461 true scaffold454: 667981-675441 Linum usitatissimum
Lus10020217.g 1.0kb upstream 1.0kb upstream 1000 false scaffold454: 674442-675441 Linum usitatissimum
Lus10020217.g 1.0kb downstream 1.0kb downstream 7461 true scaffold454: 666981-674441 Linum usitatissimum
Lus10020217.g 1.0kb downstream 1.0kb downstream 1000 false scaffold454: 666981-667980 Linum usitatissimum
Lus10020217.g 2.0kb upstream 2.0kb upstream 8461 true scaffold454: 667981-676441 Linum usitatissimum
Lus10020217.g 2.0kb upstream 2.0kb upstream 2000 false scaffold454: 674442-676441 Linum usitatissimum
Lus10020217.g 2.0kb downstream 2.0kb downstream 8461 true scaffold454: 665981-674441 Linum usitatissimum
Lus10020217.g 2.0kb downstream 2.0kb downstream 2000 false scaffold454: 665981-667980 Linum usitatissimum
Lus10020217.g 5.0kb upstream 5.0kb upstream 11461 true scaffold454: 667981-679441 Linum usitatissimum
Lus10020217.g 5.0kb upstream 5.0kb upstream 5000 false scaffold454: 674442-679441 Linum usitatissimum
Lus10020217.g 5.0kb downstream 5.0kb downstream 11461 true scaffold454: 662981-674441 Linum usitatissimum
Lus10020217.g 5.0kb downstream 5.0kb downstream 5000 false scaffold454: 662981-667980 Linum usitatissimum
Lus10020217.g 10.0kb upstream 10.0kb upstream 16461 true scaffold454: 667981-684441 Linum usitatissimum
Lus10020217.g 10.0kb upstream 10.0kb upstream 10000 false scaffold454: 674442-684441 Linum usitatissimum
Lus10020217.g 10.0kb downstream 10.0kb downstream 16461 true scaffold454: 657981-674441 Linum usitatissimum
Lus10020217.g 10.0kb downstream 10.0kb downstream 10000 false scaffold454: 657981-667980 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459124 5262 Malpighiales View MSA
124238434 5268 Malvidae View MSA
124062723 5270 Rosid View MSA
123742505 5271 Pentapetalae View MSA
122793605 5272 Eudicot View MSA
122043899 5273 Angiosperm View MSA
121349940 5274 Embryophyte View MSA
123426394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain