Gene : Lus10037189.g L. usitatissimum v1.0
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  140
Name:  ? Lus10037189.g Secondary Identifier:  ? PAC:23152508
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum ARO-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6163 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10037189.g 0.5kb upstream 0.5kb upstream 3909 true scaffold462: 623992-627900 Linum usitatissimum
Lus10037189.g 0.5kb upstream 0.5kb upstream 500 false scaffold462: 627401-627900 Linum usitatissimum
Lus10037189.g 0.5kb downstream 0.5kb downstream 3909 true scaffold462: 623492-627400 Linum usitatissimum
Lus10037189.g 0.5kb downstream 0.5kb downstream 500 false scaffold462: 623492-623991 Linum usitatissimum
Lus10037189.g 1.0kb upstream 1.0kb upstream 4409 true scaffold462: 623992-628400 Linum usitatissimum
Lus10037189.g 1.0kb upstream 1.0kb upstream 1000 false scaffold462: 627401-628400 Linum usitatissimum
Lus10037189.g 1.0kb downstream 1.0kb downstream 4409 true scaffold462: 622992-627400 Linum usitatissimum
Lus10037189.g 1.0kb downstream 1.0kb downstream 1000 false scaffold462: 622992-623991 Linum usitatissimum
Lus10037189.g 2.0kb upstream 2.0kb upstream 5409 true scaffold462: 623992-629400 Linum usitatissimum
Lus10037189.g 2.0kb upstream 2.0kb upstream 2000 false scaffold462: 627401-629400 Linum usitatissimum
Lus10037189.g 2.0kb downstream 2.0kb downstream 5409 true scaffold462: 621992-627400 Linum usitatissimum
Lus10037189.g 2.0kb downstream 2.0kb downstream 2000 false scaffold462: 621992-623991 Linum usitatissimum
Lus10037189.g 5.0kb upstream 5.0kb upstream 8409 true scaffold462: 623992-632400 Linum usitatissimum
Lus10037189.g 5.0kb upstream 5.0kb upstream 5000 false scaffold462: 627401-632400 Linum usitatissimum
Lus10037189.g 5.0kb downstream 5.0kb downstream 8409 true scaffold462: 618992-627400 Linum usitatissimum
Lus10037189.g 5.0kb downstream 5.0kb downstream 5000 false scaffold462: 618992-623991 Linum usitatissimum
Lus10037189.g 10.0kb upstream 10.0kb upstream 13409 true scaffold462: 623992-637400 Linum usitatissimum
Lus10037189.g 10.0kb upstream 10.0kb upstream 10000 false scaffold462: 627401-637400 Linum usitatissimum
Lus10037189.g 10.0kb downstream 10.0kb downstream 13409 true scaffold462: 613992-627400 Linum usitatissimum
Lus10037189.g 10.0kb downstream 10.0kb downstream 10000 false scaffold462: 613992-623991 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122451707 5262 Malpighiales View MSA
124238630 5268 Malvidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain