Gene : Lus10028753.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00289//PF02453//PF02785//PF13535 - Carbamoyl-phosphate synthase L chain, N-terminal domain (CPSase_L_chain) // Reticulon (Reticulon) // Biotin carboxylase C-terminal domain (Biotin_carb_C) // ATP-grasp domain (ATP-grasp_4) Genomic Order:  15
Name:  ? Lus10028753.g Secondary Identifier:  ? PAC:23177269
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY0-1264 Linum usitatissimum pathologic  
Lusitatissimum PWY-4381 Linum usitatissimum pathologic  
Lusitatissimum PWY-5156 Linum usitatissimum pathologic  
Lusitatissimum PWY-7388 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10028753.g 0.5kb upstream 0.5kb upstream 8659 true scaffold540: 61211-69869 Linum usitatissimum
Lus10028753.g 0.5kb upstream 0.5kb upstream 500 false scaffold540: 69370-69869 Linum usitatissimum
Lus10028753.g 0.5kb downstream 0.5kb downstream 8659 true scaffold540: 60711-69369 Linum usitatissimum
Lus10028753.g 0.5kb downstream 0.5kb downstream 500 false scaffold540: 60711-61210 Linum usitatissimum
Lus10028753.g 1.0kb upstream 1.0kb upstream 9159 true scaffold540: 61211-70369 Linum usitatissimum
Lus10028753.g 1.0kb upstream 1.0kb upstream 1000 false scaffold540: 69370-70369 Linum usitatissimum
Lus10028753.g 1.0kb downstream 1.0kb downstream 9159 true scaffold540: 60211-69369 Linum usitatissimum
Lus10028753.g 1.0kb downstream 1.0kb downstream 1000 false scaffold540: 60211-61210 Linum usitatissimum
Lus10028753.g 2.0kb upstream 2.0kb upstream 10159 true scaffold540: 61211-71369 Linum usitatissimum
Lus10028753.g 2.0kb upstream 2.0kb upstream 2000 false scaffold540: 69370-71369 Linum usitatissimum
Lus10028753.g 2.0kb downstream 2.0kb downstream 10159 true scaffold540: 59211-69369 Linum usitatissimum
Lus10028753.g 2.0kb downstream 2.0kb downstream 2000 false scaffold540: 59211-61210 Linum usitatissimum
Lus10028753.g 5.0kb upstream 5.0kb upstream 13159 true scaffold540: 61211-74369 Linum usitatissimum
Lus10028753.g 5.0kb upstream 5.0kb upstream 5000 false scaffold540: 69370-74369 Linum usitatissimum
Lus10028753.g 5.0kb downstream 5.0kb downstream 13159 true scaffold540: 56211-69369 Linum usitatissimum
Lus10028753.g 5.0kb downstream 5.0kb downstream 5000 false scaffold540: 56211-61210 Linum usitatissimum
Lus10028753.g 10.0kb upstream 10.0kb upstream 18159 true scaffold540: 61211-79369 Linum usitatissimum
Lus10028753.g 10.0kb upstream 10.0kb upstream 10000 false scaffold540: 69370-79369 Linum usitatissimum
Lus10028753.g 10.0kb downstream 10.0kb downstream 18159 true scaffold540: 51211-69369 Linum usitatissimum
Lus10028753.g 10.0kb downstream 10.0kb downstream 10000 false scaffold540: 51211-61210 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121560684 5273 Angiosperm Singleton cluster - no MSA
122421793 5262 Malpighiales Singleton cluster - no MSA
124213966 5268 Malvidae Singleton cluster - no MSA
123931754 5270 Rosid Singleton cluster - no MSA
123511039 5271 Pentapetalae Singleton cluster - no MSA
122546099 5272 Eudicot Singleton cluster - no MSA
120833258 5274 Embryophyte Singleton cluster - no MSA
122874582 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain