Gene : Lus10020357.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  122
Name:  ? Lus10020357.g Secondary Identifier:  ? PAC:23144154
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1422 Linum usitatissimum pathologic  
Lusitatissimum PWY-7436 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10020357.g 0.5kb upstream 0.5kb upstream 2391 true scaffold641: 533817-536207 Linum usitatissimum
Lus10020357.g 0.5kb upstream 0.5kb upstream 500 false scaffold641: 533817-534316 Linum usitatissimum
Lus10020357.g 0.5kb downstream 0.5kb downstream 2391 true scaffold641: 534317-536707 Linum usitatissimum
Lus10020357.g 0.5kb downstream 0.5kb downstream 500 false scaffold641: 536208-536707 Linum usitatissimum
Lus10020357.g 1.0kb upstream 1.0kb upstream 2891 true scaffold641: 533317-536207 Linum usitatissimum
Lus10020357.g 1.0kb upstream 1.0kb upstream 1000 false scaffold641: 533317-534316 Linum usitatissimum
Lus10020357.g 1.0kb downstream 1.0kb downstream 2891 true scaffold641: 534317-537207 Linum usitatissimum
Lus10020357.g 1.0kb downstream 1.0kb downstream 1000 false scaffold641: 536208-537207 Linum usitatissimum
Lus10020357.g 2.0kb upstream 2.0kb upstream 3891 true scaffold641: 532317-536207 Linum usitatissimum
Lus10020357.g 2.0kb upstream 2.0kb upstream 2000 false scaffold641: 532317-534316 Linum usitatissimum
Lus10020357.g 2.0kb downstream 2.0kb downstream 3891 true scaffold641: 534317-538207 Linum usitatissimum
Lus10020357.g 2.0kb downstream 2.0kb downstream 2000 false scaffold641: 536208-538207 Linum usitatissimum
Lus10020357.g 5.0kb upstream 5.0kb upstream 6891 true scaffold641: 529317-536207 Linum usitatissimum
Lus10020357.g 5.0kb upstream 5.0kb upstream 5000 false scaffold641: 529317-534316 Linum usitatissimum
Lus10020357.g 5.0kb downstream 5.0kb downstream 6891 true scaffold641: 534317-541207 Linum usitatissimum
Lus10020357.g 5.0kb downstream 5.0kb downstream 5000 false scaffold641: 536208-541207 Linum usitatissimum
Lus10020357.g 10.0kb upstream 10.0kb upstream 11891 true scaffold641: 524317-536207 Linum usitatissimum
Lus10020357.g 10.0kb upstream 10.0kb upstream 10000 false scaffold641: 524317-534316 Linum usitatissimum
Lus10020357.g 10.0kb downstream 10.0kb downstream 11891 true scaffold641: 534317-546207 Linum usitatissimum
Lus10020357.g 10.0kb downstream 10.0kb downstream 10000 false scaffold641: 536208-546207 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458002 5262 Malpighiales View MSA
124238021 5268 Malvidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain