Gene : Lus10001725.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR21089//PTHR21089:SF10 - SHIKIMATE DEHYDROGENASE Genomic Order:  15
Name:  ? Lus10001725.g Secondary Identifier:  ? PAC:23142980
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum ARO-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6163 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10001725.g 0.5kb upstream 0.5kb upstream 3305 true scaffold731: 76099-79403 Linum usitatissimum
Lus10001725.g 0.5kb upstream 0.5kb upstream 500 false scaffold731: 76099-76598 Linum usitatissimum
Lus10001725.g 0.5kb downstream 0.5kb downstream 3305 true scaffold731: 76599-79903 Linum usitatissimum
Lus10001725.g 0.5kb downstream 0.5kb downstream 500 false scaffold731: 79404-79903 Linum usitatissimum
Lus10001725.g 1.0kb upstream 1.0kb upstream 3805 true scaffold731: 75599-79403 Linum usitatissimum
Lus10001725.g 1.0kb upstream 1.0kb upstream 1000 false scaffold731: 75599-76598 Linum usitatissimum
Lus10001725.g 1.0kb downstream 1.0kb downstream 3805 true scaffold731: 76599-80403 Linum usitatissimum
Lus10001725.g 1.0kb downstream 1.0kb downstream 1000 false scaffold731: 79404-80403 Linum usitatissimum
Lus10001725.g 2.0kb upstream 2.0kb upstream 4805 true scaffold731: 74599-79403 Linum usitatissimum
Lus10001725.g 2.0kb upstream 2.0kb upstream 2000 false scaffold731: 74599-76598 Linum usitatissimum
Lus10001725.g 2.0kb downstream 2.0kb downstream 4805 true scaffold731: 76599-81403 Linum usitatissimum
Lus10001725.g 2.0kb downstream 2.0kb downstream 2000 false scaffold731: 79404-81403 Linum usitatissimum
Lus10001725.g 5.0kb upstream 5.0kb upstream 7805 true scaffold731: 71599-79403 Linum usitatissimum
Lus10001725.g 5.0kb upstream 5.0kb upstream 5000 false scaffold731: 71599-76598 Linum usitatissimum
Lus10001725.g 5.0kb downstream 5.0kb downstream 7805 true scaffold731: 76599-84403 Linum usitatissimum
Lus10001725.g 5.0kb downstream 5.0kb downstream 5000 false scaffold731: 79404-84403 Linum usitatissimum
Lus10001725.g 10.0kb upstream 10.0kb upstream 12805 true scaffold731: 66599-79403 Linum usitatissimum
Lus10001725.g 10.0kb upstream 10.0kb upstream 10000 false scaffold731: 66599-76598 Linum usitatissimum
Lus10001725.g 10.0kb downstream 10.0kb downstream 12805 true scaffold731: 76599-89403 Linum usitatissimum
Lus10001725.g 10.0kb downstream 10.0kb downstream 10000 false scaffold731: 79404-89403 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791917 5273 Angiosperm View MSA
122461731 5262 Malpighiales View MSA
124246373 5268 Malvidae View MSA
124070168 5270 Rosid View MSA
123749206 5271 Pentapetalae View MSA
122795293 5272 Eudicot View MSA
121063186 5274 Embryophyte View MSA
123102956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain