Gene : Lus10001921.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10890:SF8 - CYSTEINYL-TRNA SYNTHETASE Genomic Order:  5
Name:  ? Lus10001921.g Secondary Identifier:  ? PAC:23175273
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10001921.g 0.5kb upstream 0.5kb upstream 3453 true scaffold811: 20284-23736 Linum usitatissimum
Lus10001921.g 0.5kb upstream 0.5kb upstream 500 false scaffold811: 20284-20783 Linum usitatissimum
Lus10001921.g 0.5kb downstream 0.5kb downstream 3453 true scaffold811: 20784-24236 Linum usitatissimum
Lus10001921.g 0.5kb downstream 0.5kb downstream 500 false scaffold811: 23737-24236 Linum usitatissimum
Lus10001921.g 1.0kb upstream 1.0kb upstream 3953 true scaffold811: 19784-23736 Linum usitatissimum
Lus10001921.g 1.0kb upstream 1.0kb upstream 1000 false scaffold811: 19784-20783 Linum usitatissimum
Lus10001921.g 1.0kb downstream 1.0kb downstream 3953 true scaffold811: 20784-24736 Linum usitatissimum
Lus10001921.g 1.0kb downstream 1.0kb downstream 1000 false scaffold811: 23737-24736 Linum usitatissimum
Lus10001921.g 2.0kb upstream 2.0kb upstream 4953 true scaffold811: 18784-23736 Linum usitatissimum
Lus10001921.g 2.0kb upstream 2.0kb upstream 2000 false scaffold811: 18784-20783 Linum usitatissimum
Lus10001921.g 2.0kb downstream 2.0kb downstream 4953 true scaffold811: 20784-25736 Linum usitatissimum
Lus10001921.g 2.0kb downstream 2.0kb downstream 2000 false scaffold811: 23737-25736 Linum usitatissimum
Lus10001921.g 5.0kb upstream 5.0kb upstream 7953 true scaffold811: 15784-23736 Linum usitatissimum
Lus10001921.g 5.0kb upstream 5.0kb upstream 5000 false scaffold811: 15784-20783 Linum usitatissimum
Lus10001921.g 5.0kb downstream 5.0kb downstream 7953 true scaffold811: 20784-28736 Linum usitatissimum
Lus10001921.g 5.0kb downstream 5.0kb downstream 5000 false scaffold811: 23737-28736 Linum usitatissimum
Lus10001921.g 10.0kb upstream 10.0kb upstream 12953 true scaffold811: 10784-23736 Linum usitatissimum
Lus10001921.g 10.0kb upstream 10.0kb upstream 10000 false scaffold811: 10784-20783 Linum usitatissimum
Lus10001921.g 10.0kb downstream 10.0kb downstream 12953 true scaffold811: 20784-33736 Linum usitatissimum
Lus10001921.g 10.0kb downstream 10.0kb downstream 10000 false scaffold811: 23737-33736 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457432 5262 Malpighiales View MSA
124240363 5268 Malvidae View MSA
124064114 5270 Rosid View MSA
123740490 5271 Pentapetalae View MSA
122796525 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain