Gene : Lus10001416.g L. usitatissimum v1.0
Defline:  (1 of 2) KOG1459 - Squalene synthetase Genomic Order:  7
Name:  ? Lus10001416.g Secondary Identifier:  ? PAC:23145932
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CAROTENOID-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6475 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10001416.g 0.5kb upstream 0.5kb upstream 2479 true scaffold85: 30097-32575 Linum usitatissimum
Lus10001416.g 0.5kb upstream 0.5kb upstream 500 false scaffold85: 32076-32575 Linum usitatissimum
Lus10001416.g 0.5kb downstream 0.5kb downstream 2479 true scaffold85: 29597-32075 Linum usitatissimum
Lus10001416.g 0.5kb downstream 0.5kb downstream 500 false scaffold85: 29597-30096 Linum usitatissimum
Lus10001416.g 1.0kb upstream 1.0kb upstream 2979 true scaffold85: 30097-33075 Linum usitatissimum
Lus10001416.g 1.0kb upstream 1.0kb upstream 1000 false scaffold85: 32076-33075 Linum usitatissimum
Lus10001416.g 1.0kb downstream 1.0kb downstream 2979 true scaffold85: 29097-32075 Linum usitatissimum
Lus10001416.g 1.0kb downstream 1.0kb downstream 1000 false scaffold85: 29097-30096 Linum usitatissimum
Lus10001416.g 2.0kb upstream 2.0kb upstream 3979 true scaffold85: 30097-34075 Linum usitatissimum
Lus10001416.g 2.0kb upstream 2.0kb upstream 2000 false scaffold85: 32076-34075 Linum usitatissimum
Lus10001416.g 2.0kb downstream 2.0kb downstream 3979 true scaffold85: 28097-32075 Linum usitatissimum
Lus10001416.g 2.0kb downstream 2.0kb downstream 2000 false scaffold85: 28097-30096 Linum usitatissimum
Lus10001416.g 5.0kb upstream 5.0kb upstream 6979 true scaffold85: 30097-37075 Linum usitatissimum
Lus10001416.g 5.0kb upstream 5.0kb upstream 5000 false scaffold85: 32076-37075 Linum usitatissimum
Lus10001416.g 5.0kb downstream 5.0kb downstream 6979 true scaffold85: 25097-32075 Linum usitatissimum
Lus10001416.g 5.0kb downstream 5.0kb downstream 5000 false scaffold85: 25097-30096 Linum usitatissimum
Lus10001416.g 10.0kb upstream 10.0kb upstream 11979 true scaffold85: 30097-42075 Linum usitatissimum
Lus10001416.g 10.0kb upstream 10.0kb upstream 10000 false scaffold85: 32076-42075 Linum usitatissimum
Lus10001416.g 10.0kb downstream 10.0kb downstream 11979 true scaffold85: 20097-32075 Linum usitatissimum
Lus10001416.g 10.0kb downstream 10.0kb downstream 10000 false scaffold85: 20097-30096 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain