Gene : Lus10009007.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR12820 - VACUOLAR SORTING PROTEIN 53 Genomic Order:  19
Name:  ? Lus10009007.g Secondary Identifier:  ? PAC:23173385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009007.g 0.5kb upstream 0.5kb upstream 7988 true scaffold883: 49399-57386 Linum usitatissimum
Lus10009007.g 0.5kb upstream 0.5kb upstream 500 false scaffold883: 56887-57386 Linum usitatissimum
Lus10009007.g 0.5kb downstream 0.5kb downstream 7988 true scaffold883: 48899-56886 Linum usitatissimum
Lus10009007.g 0.5kb downstream 0.5kb downstream 500 false scaffold883: 48899-49398 Linum usitatissimum
Lus10009007.g 1.0kb upstream 1.0kb upstream 8488 true scaffold883: 49399-57886 Linum usitatissimum
Lus10009007.g 1.0kb upstream 1.0kb upstream 1000 false scaffold883: 56887-57886 Linum usitatissimum
Lus10009007.g 1.0kb downstream 1.0kb downstream 8488 true scaffold883: 48399-56886 Linum usitatissimum
Lus10009007.g 1.0kb downstream 1.0kb downstream 1000 false scaffold883: 48399-49398 Linum usitatissimum
Lus10009007.g 2.0kb upstream 2.0kb upstream 9488 true scaffold883: 49399-58886 Linum usitatissimum
Lus10009007.g 2.0kb upstream 2.0kb upstream 2000 false scaffold883: 56887-58886 Linum usitatissimum
Lus10009007.g 2.0kb downstream 2.0kb downstream 9488 true scaffold883: 47399-56886 Linum usitatissimum
Lus10009007.g 2.0kb downstream 2.0kb downstream 2000 false scaffold883: 47399-49398 Linum usitatissimum
Lus10009007.g 5.0kb upstream 5.0kb upstream 12488 true scaffold883: 49399-61886 Linum usitatissimum
Lus10009007.g 5.0kb upstream 5.0kb upstream 5000 false scaffold883: 56887-61886 Linum usitatissimum
Lus10009007.g 5.0kb downstream 5.0kb downstream 12488 true scaffold883: 44399-56886 Linum usitatissimum
Lus10009007.g 5.0kb downstream 5.0kb downstream 5000 false scaffold883: 44399-49398 Linum usitatissimum
Lus10009007.g 10.0kb upstream 10.0kb upstream 17488 true scaffold883: 49399-66886 Linum usitatissimum
Lus10009007.g 10.0kb upstream 10.0kb upstream 10000 false scaffold883: 56887-66886 Linum usitatissimum
Lus10009007.g 10.0kb downstream 10.0kb downstream 17488 true scaffold883: 39399-56886 Linum usitatissimum
Lus10009007.g 10.0kb downstream 10.0kb downstream 10000 false scaffold883: 39399-49398 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452288 5262 Malpighiales View MSA
124237123 5268 Malvidae View MSA
124060785 5270 Rosid View MSA
123745504 5271 Pentapetalae View MSA
122792209 5272 Eudicot View MSA
122042616 5273 Angiosperm View MSA
121345322 5274 Embryophyte View MSA
123426739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain