Gene : Lus10016166.g L. usitatissimum v1.0
Defline:  (1 of 5) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  3
Name:  ? Lus10016166.g Secondary Identifier:  ? PAC:23142655
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10016166.g 0.5kb upstream 0.5kb upstream 1781 true scaffold947: 11906-13686 Linum usitatissimum
Lus10016166.g 0.5kb upstream 0.5kb upstream 500 false scaffold947: 13187-13686 Linum usitatissimum
Lus10016166.g 0.5kb downstream 0.5kb downstream 1781 true scaffold947: 11406-13186 Linum usitatissimum
Lus10016166.g 0.5kb downstream 0.5kb downstream 500 false scaffold947: 11406-11905 Linum usitatissimum
Lus10016166.g 1.0kb upstream 1.0kb upstream 2281 true scaffold947: 11906-14186 Linum usitatissimum
Lus10016166.g 1.0kb upstream 1.0kb upstream 1000 false scaffold947: 13187-14186 Linum usitatissimum
Lus10016166.g 1.0kb downstream 1.0kb downstream 2281 true scaffold947: 10906-13186 Linum usitatissimum
Lus10016166.g 1.0kb downstream 1.0kb downstream 1000 false scaffold947: 10906-11905 Linum usitatissimum
Lus10016166.g 2.0kb upstream 2.0kb upstream 3281 true scaffold947: 11906-15186 Linum usitatissimum
Lus10016166.g 2.0kb upstream 2.0kb upstream 2000 false scaffold947: 13187-15186 Linum usitatissimum
Lus10016166.g 2.0kb downstream 2.0kb downstream 3281 true scaffold947: 9906-13186 Linum usitatissimum
Lus10016166.g 2.0kb downstream 2.0kb downstream 2000 false scaffold947: 9906-11905 Linum usitatissimum
Lus10016166.g 5.0kb upstream 5.0kb upstream 6281 true scaffold947: 11906-18186 Linum usitatissimum
Lus10016166.g 5.0kb upstream 5.0kb upstream 5000 false scaffold947: 13187-18186 Linum usitatissimum
Lus10016166.g 5.0kb downstream 5.0kb downstream 6281 true scaffold947: 6906-13186 Linum usitatissimum
Lus10016166.g 5.0kb downstream 5.0kb downstream 5000 false scaffold947: 6906-11905 Linum usitatissimum
Lus10016166.g 10.0kb upstream 10.0kb upstream 11281 true scaffold947: 11906-23186 Linum usitatissimum
Lus10016166.g 10.0kb upstream 10.0kb upstream 10000 false scaffold947: 13187-23186 Linum usitatissimum
Lus10016166.g 10.0kb downstream 10.0kb downstream 11281 true scaffold947: 1906-13186 Linum usitatissimum
Lus10016166.g 10.0kb downstream 10.0kb downstream 10000 false scaffold947: 1906-11905 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458557 5262 Malpighiales View MSA
124240092 5268 Malvidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain