Gene : Brdisv1Bd29-11019924m.g B. distachyon Bd29-1 v1
Defline:  (1 of 12) KOG0978 - E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  208
Name:  ? Brdisv1Bd29-11019924m.g Secondary Identifier:  ? PAC:34113149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1Bd29-11019924m.g 0.5kb upstream 0.5kb upstream 8484 true pseudomolecule_3: 1136674-1145157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 0.5kb upstream 0.5kb upstream 500 false pseudomolecule_3: 1136674-1137173 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 0.5kb downstream 0.5kb downstream 8484 true pseudomolecule_3: 1137174-1145657 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 0.5kb downstream 0.5kb downstream 500 false pseudomolecule_3: 1145158-1145657 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 1.0kb upstream 1.0kb upstream 8984 true pseudomolecule_3: 1136174-1145157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 1.0kb upstream 1.0kb upstream 1000 false pseudomolecule_3: 1136174-1137173 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 1.0kb downstream 1.0kb downstream 8984 true pseudomolecule_3: 1137174-1146157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 1.0kb downstream 1.0kb downstream 1000 false pseudomolecule_3: 1145158-1146157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 2.0kb upstream 2.0kb upstream 9984 true pseudomolecule_3: 1135174-1145157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 2.0kb upstream 2.0kb upstream 2000 false pseudomolecule_3: 1135174-1137173 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 2.0kb downstream 2.0kb downstream 9984 true pseudomolecule_3: 1137174-1147157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 2.0kb downstream 2.0kb downstream 2000 false pseudomolecule_3: 1145158-1147157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 5.0kb upstream 5.0kb upstream 12984 true pseudomolecule_3: 1132174-1145157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 5.0kb upstream 5.0kb upstream 5000 false pseudomolecule_3: 1132174-1137173 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 5.0kb downstream 5.0kb downstream 12984 true pseudomolecule_3: 1137174-1150157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 5.0kb downstream 5.0kb downstream 5000 false pseudomolecule_3: 1145158-1150157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 10.0kb upstream 10.0kb upstream 17984 true pseudomolecule_3: 1127174-1145157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 10.0kb upstream 10.0kb upstream 10000 false pseudomolecule_3: 1127174-1137173 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 10.0kb downstream 10.0kb downstream 17984 true pseudomolecule_3: 1137174-1155157 Brachypodium distachyon Bd29-1
Brdisv1Bd29-11019924m.g 10.0kb downstream 10.0kb downstream 10000 false pseudomolecule_3: 1145158-1155157 Brachypodium distachyon Bd29-1

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66094387 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier