Gene : Potri.001G370000 P. trichocarpa v3.0
Defline:  (1 of 2) KOG3289 - Uncharacterized conserved protein encoded by sequence overlapping the COX4 gene Genomic Order:  3700
Name:  ? Potri.001G370000 Secondary Identifier:  ? PAC:27041209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G370000 0.5kb upstream 0.5kb upstream 5518 true Chr01: 38398140-38403657 Populus trichocarpa
Potri.001G370000 0.5kb upstream 0.5kb upstream 500 false Chr01: 38403158-38403657 Populus trichocarpa
Potri.001G370000 0.5kb downstream 0.5kb downstream 5518 true Chr01: 38397640-38403157 Populus trichocarpa
Potri.001G370000 0.5kb downstream 0.5kb downstream 500 false Chr01: 38397640-38398139 Populus trichocarpa
Potri.001G370000 1.0kb upstream 1.0kb upstream 6018 true Chr01: 38398140-38404157 Populus trichocarpa
Potri.001G370000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38403158-38404157 Populus trichocarpa
Potri.001G370000 1.0kb downstream 1.0kb downstream 6018 true Chr01: 38397140-38403157 Populus trichocarpa
Potri.001G370000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38397140-38398139 Populus trichocarpa
Potri.001G370000 2.0kb upstream 2.0kb upstream 7018 true Chr01: 38398140-38405157 Populus trichocarpa
Potri.001G370000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38403158-38405157 Populus trichocarpa
Potri.001G370000 2.0kb downstream 2.0kb downstream 7018 true Chr01: 38396140-38403157 Populus trichocarpa
Potri.001G370000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38396140-38398139 Populus trichocarpa
Potri.001G370000 5.0kb upstream 5.0kb upstream 10018 true Chr01: 38398140-38408157 Populus trichocarpa
Potri.001G370000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38403158-38408157 Populus trichocarpa
Potri.001G370000 5.0kb downstream 5.0kb downstream 10018 true Chr01: 38393140-38403157 Populus trichocarpa
Potri.001G370000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38393140-38398139 Populus trichocarpa
Potri.001G370000 10.0kb upstream 10.0kb upstream 15018 true Chr01: 38398140-38413157 Populus trichocarpa
Potri.001G370000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38403158-38413157 Populus trichocarpa
Potri.001G370000 10.0kb downstream 10.0kb downstream 15018 true Chr01: 38388140-38403157 Populus trichocarpa
Potri.001G370000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38388140-38398139 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.078       Low
cufflinks 2.731        
cufflinks 2.936        
cufflinks 1.492       Low
cufflinks 3.208        
cufflinks 2.498        
cufflinks 3.043        
cufflinks 4.572       High
cufflinks 4.604       High
cufflinks 4.024       High
cufflinks 2.869        
cufflinks 4.143       High
cufflinks 4.223       High
cufflinks 3.806        
cufflinks 1.638       Low
cufflinks 2.723        
cufflinks 3.012        
cufflinks 2.954        
cufflinks 3.401        
cufflinks 2.142        
cufflinks 1.612       Low
cufflinks 2.76        
cufflinks 3.393        
cufflinks 3.178        
cufflinks 51.728     High  
cufflinks 43.223     High  
cufflinks 51.607     High  
cufflinks 45.42     High  
cufflinks 57.842     High  
cufflinks 38.949     High Low

0 Strain