Gene : Potri.001G146600 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR12050//PTHR12050:SF1 - LEPTIN RECEPTOR-RELATED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG Genomic Order:  1466
Name:  ? Potri.001G146600 Secondary Identifier:  ? PAC:27041996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G146600 0.5kb upstream 0.5kb upstream 3538 true Chr01: 11941216-11944753 Populus trichocarpa
Potri.001G146600 0.5kb upstream 0.5kb upstream 500 false Chr01: 11941216-11941715 Populus trichocarpa
Potri.001G146600 0.5kb downstream 0.5kb downstream 3538 true Chr01: 11941716-11945253 Populus trichocarpa
Potri.001G146600 0.5kb downstream 0.5kb downstream 500 false Chr01: 11944754-11945253 Populus trichocarpa
Potri.001G146600 1.0kb upstream 1.0kb upstream 4038 true Chr01: 11940716-11944753 Populus trichocarpa
Potri.001G146600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 11940716-11941715 Populus trichocarpa
Potri.001G146600 1.0kb downstream 1.0kb downstream 4038 true Chr01: 11941716-11945753 Populus trichocarpa
Potri.001G146600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 11944754-11945753 Populus trichocarpa
Potri.001G146600 2.0kb upstream 2.0kb upstream 5038 true Chr01: 11939716-11944753 Populus trichocarpa
Potri.001G146600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 11939716-11941715 Populus trichocarpa
Potri.001G146600 2.0kb downstream 2.0kb downstream 5038 true Chr01: 11941716-11946753 Populus trichocarpa
Potri.001G146600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 11944754-11946753 Populus trichocarpa
Potri.001G146600 5.0kb upstream 5.0kb upstream 8038 true Chr01: 11936716-11944753 Populus trichocarpa
Potri.001G146600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 11936716-11941715 Populus trichocarpa
Potri.001G146600 5.0kb downstream 5.0kb downstream 8038 true Chr01: 11941716-11949753 Populus trichocarpa
Potri.001G146600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 11944754-11949753 Populus trichocarpa
Potri.001G146600 10.0kb upstream 10.0kb upstream 13038 true Chr01: 11931716-11944753 Populus trichocarpa
Potri.001G146600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 11931716-11941715 Populus trichocarpa
Potri.001G146600 10.0kb downstream 10.0kb downstream 13038 true Chr01: 11941716-11954753 Populus trichocarpa
Potri.001G146600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 11944754-11954753 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.235        
cufflinks 0.612       Low
cufflinks 0.763       Low
cufflinks 1.382        
cufflinks 4.638       High
cufflinks 3.291       High
cufflinks 1.489        
cufflinks 4.19       High
cufflinks 1.107        
cufflinks 1.525        
cufflinks 1.793        
cufflinks 2.443        
cufflinks 2.592        
cufflinks 1.413        
cufflinks 3.146        
cufflinks 2.044        
cufflinks 1.689        
cufflinks 2.014        
cufflinks 0.971       Low
cufflinks 3.056        
cufflinks 1.857        
cufflinks 4.398       High
cufflinks 1.585        
cufflinks 1.854        
cufflinks 13.84        
cufflinks 16.189        
cufflinks 24.023       High
cufflinks 21.204        
cufflinks 24.721       High
cufflinks 14.151        

0 Strain