Gene : Potri.009G012000 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR13509//PTHR13509:SF4 - SEC61BETA-PROV PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  120
Name:  ? Potri.009G012000 Secondary Identifier:  ? PAC:26987375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G012000 0.5kb upstream 0.5kb upstream 1741 true Chr09: 2099046-2100786 Populus trichocarpa
Potri.009G012000 0.5kb upstream 0.5kb upstream 500 false Chr09: 2099046-2099545 Populus trichocarpa
Potri.009G012000 0.5kb downstream 0.5kb downstream 1741 true Chr09: 2099546-2101286 Populus trichocarpa
Potri.009G012000 0.5kb downstream 0.5kb downstream 500 false Chr09: 2100787-2101286 Populus trichocarpa
Potri.009G012000 1.0kb upstream 1.0kb upstream 2241 true Chr09: 2098546-2100786 Populus trichocarpa
Potri.009G012000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2098546-2099545 Populus trichocarpa
Potri.009G012000 1.0kb downstream 1.0kb downstream 2241 true Chr09: 2099546-2101786 Populus trichocarpa
Potri.009G012000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2100787-2101786 Populus trichocarpa
Potri.009G012000 2.0kb upstream 2.0kb upstream 3241 true Chr09: 2097546-2100786 Populus trichocarpa
Potri.009G012000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2097546-2099545 Populus trichocarpa
Potri.009G012000 2.0kb downstream 2.0kb downstream 3241 true Chr09: 2099546-2102786 Populus trichocarpa
Potri.009G012000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2100787-2102786 Populus trichocarpa
Potri.009G012000 5.0kb upstream 5.0kb upstream 6241 true Chr09: 2094546-2100786 Populus trichocarpa
Potri.009G012000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2094546-2099545 Populus trichocarpa
Potri.009G012000 5.0kb downstream 5.0kb downstream 6241 true Chr09: 2099546-2105786 Populus trichocarpa
Potri.009G012000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2100787-2105786 Populus trichocarpa
Potri.009G012000 10.0kb upstream 10.0kb upstream 11241 true Chr09: 2089546-2100786 Populus trichocarpa
Potri.009G012000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2089546-2099545 Populus trichocarpa
Potri.009G012000 10.0kb downstream 10.0kb downstream 11241 true Chr09: 2099546-2110786 Populus trichocarpa
Potri.009G012000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2100787-2110786 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.687     High  
cufflinks 3.252        
cufflinks 15.763     High High
cufflinks 25.38     High High
cufflinks 9.592        
cufflinks 5.817        
cufflinks 22.079     High High
cufflinks 6.789        
cufflinks 1.856       Low
cufflinks 6.486        
cufflinks 3.981        
cufflinks 8.9        
cufflinks 6.511        
cufflinks 9.187     High  
cufflinks 3.885        
cufflinks 4.228        
cufflinks 2.373       Low
cufflinks 9.724        
cufflinks 1.393       Low
cufflinks 9.306        
cufflinks 2.767        
cufflinks 2.354       Low
cufflinks 11.023     High  
cufflinks 2.681       Low
cufflinks 28.728     High High
cufflinks 16.293        
cufflinks 12.374        
cufflinks 12.799        
cufflinks 18.291        
cufflinks 11.654        

0 Strain