Gene : Potri.001G380500 P. trichocarpa v3.0
Defline:  (1 of 2) 2.5.1.90 - All-trans-octaprenyl-diphosphate synthase / Trans-prenyltransferase Genomic Order:  3805
Name:  ? Potri.001G380500 Secondary Identifier:  ? PAC:27042849
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Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5805 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5910 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6520 Populus trichocarpa pathologic  
Ptrichocarpa HEXPPSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5864 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5807 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5783 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5120 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G380500 0.5kb upstream 0.5kb upstream 5357 true Chr01: 39656464-39661820 Populus trichocarpa
Potri.001G380500 0.5kb upstream 0.5kb upstream 500 false Chr01: 39661321-39661820 Populus trichocarpa
Potri.001G380500 0.5kb downstream 0.5kb downstream 5357 true Chr01: 39655964-39661320 Populus trichocarpa
Potri.001G380500 0.5kb downstream 0.5kb downstream 500 false Chr01: 39655964-39656463 Populus trichocarpa
Potri.001G380500 1.0kb upstream 1.0kb upstream 5857 true Chr01: 39656464-39662320 Populus trichocarpa
Potri.001G380500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39661321-39662320 Populus trichocarpa
Potri.001G380500 1.0kb downstream 1.0kb downstream 5857 true Chr01: 39655464-39661320 Populus trichocarpa
Potri.001G380500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39655464-39656463 Populus trichocarpa
Potri.001G380500 2.0kb upstream 2.0kb upstream 6857 true Chr01: 39656464-39663320 Populus trichocarpa
Potri.001G380500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39661321-39663320 Populus trichocarpa
Potri.001G380500 2.0kb downstream 2.0kb downstream 6857 true Chr01: 39654464-39661320 Populus trichocarpa
Potri.001G380500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39654464-39656463 Populus trichocarpa
Potri.001G380500 5.0kb upstream 5.0kb upstream 9857 true Chr01: 39656464-39666320 Populus trichocarpa
Potri.001G380500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39661321-39666320 Populus trichocarpa
Potri.001G380500 5.0kb downstream 5.0kb downstream 9857 true Chr01: 39651464-39661320 Populus trichocarpa
Potri.001G380500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39651464-39656463 Populus trichocarpa
Potri.001G380500 10.0kb upstream 10.0kb upstream 14857 true Chr01: 39656464-39671320 Populus trichocarpa
Potri.001G380500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39661321-39671320 Populus trichocarpa
Potri.001G380500 10.0kb downstream 10.0kb downstream 14857 true Chr01: 39646464-39661320 Populus trichocarpa
Potri.001G380500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39646464-39656463 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.98        
cufflinks 9.441     High  
cufflinks 22.68     High High
cufflinks 0.438       Low
cufflinks 4.638        
cufflinks 0.491       Low
cufflinks 3.555        
cufflinks 6.259        
cufflinks 1.95        
cufflinks 6.072        
cufflinks 6.1        
cufflinks 1.426        
cufflinks 15.564     High High
cufflinks 12.472     High High
cufflinks 5.074        
cufflinks 0.929       Low
cufflinks 2.038        
cufflinks 1.934        
cufflinks 8.567     High  
cufflinks 19.683     High High
cufflinks 1.755        
cufflinks 8.606     High  
cufflinks 6.101        
cufflinks 4.577        
cufflinks 29.325     High High
cufflinks 15.968        
cufflinks 11.766       Low
cufflinks 18.42        
cufflinks 17.059        
cufflinks 25.226        

0 Strain