Gene : Potri.001G331900 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED Genomic Order:  3319
Name:  ? Potri.001G331900 Secondary Identifier:  ? PAC:27047650
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G331900 0.5kb upstream 0.5kb upstream 5003 true Chr01: 33547583-33552585 Populus trichocarpa
Potri.001G331900 0.5kb upstream 0.5kb upstream 500 false Chr01: 33552086-33552585 Populus trichocarpa
Potri.001G331900 0.5kb downstream 0.5kb downstream 5003 true Chr01: 33547083-33552085 Populus trichocarpa
Potri.001G331900 0.5kb downstream 0.5kb downstream 500 false Chr01: 33547083-33547582 Populus trichocarpa
Potri.001G331900 1.0kb upstream 1.0kb upstream 5503 true Chr01: 33547583-33553085 Populus trichocarpa
Potri.001G331900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33552086-33553085 Populus trichocarpa
Potri.001G331900 1.0kb downstream 1.0kb downstream 5503 true Chr01: 33546583-33552085 Populus trichocarpa
Potri.001G331900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33546583-33547582 Populus trichocarpa
Potri.001G331900 2.0kb upstream 2.0kb upstream 6503 true Chr01: 33547583-33554085 Populus trichocarpa
Potri.001G331900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33552086-33554085 Populus trichocarpa
Potri.001G331900 2.0kb downstream 2.0kb downstream 6503 true Chr01: 33545583-33552085 Populus trichocarpa
Potri.001G331900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33545583-33547582 Populus trichocarpa
Potri.001G331900 5.0kb upstream 5.0kb upstream 9503 true Chr01: 33547583-33557085 Populus trichocarpa
Potri.001G331900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33552086-33557085 Populus trichocarpa
Potri.001G331900 5.0kb downstream 5.0kb downstream 9503 true Chr01: 33542583-33552085 Populus trichocarpa
Potri.001G331900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33542583-33547582 Populus trichocarpa
Potri.001G331900 10.0kb upstream 10.0kb upstream 14503 true Chr01: 33547583-33562085 Populus trichocarpa
Potri.001G331900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33552086-33562085 Populus trichocarpa
Potri.001G331900 10.0kb downstream 10.0kb downstream 14503 true Chr01: 33537583-33552085 Populus trichocarpa
Potri.001G331900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33537583-33547582 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.318       Low
cufflinks 0.946       Low
cufflinks 14.046     High High
cufflinks 4.76        
cufflinks 8.553       High
cufflinks 0.761       Low
cufflinks 4.422        
cufflinks 1.706        
cufflinks 7.641       High
cufflinks 4.157        
cufflinks 3.897        
cufflinks 4.484        
cufflinks 0.95       Low
cufflinks 6.829        
cufflinks 0.744       Low
cufflinks 4.339        
cufflinks 4.552        
cufflinks 5.199        
cufflinks 1.262       Low
cufflinks 4.693        
cufflinks 6.272        
cufflinks 1.974        
cufflinks 1.892        
cufflinks 5.583        
cufflinks 14.289        
cufflinks 9.579       Low
cufflinks 10.95        
cufflinks 13.094        
cufflinks 15.795        
cufflinks 10.107        

0 Strain