Gene : Potri.001G457000 P. trichocarpa v3.0
Defline:  (1 of 6) 1.1.1.34 - Hydroxymethylglutaryl-CoA reductase (NADPH) / HMG-CoA reductase Genomic Order:  4570
Name:  ? Potri.001G457000 Secondary Identifier:  ? PAC:27046028
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-922 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5910 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G457000 0.5kb upstream 0.5kb upstream 3804 true Chr01: 49116543-49120346 Populus trichocarpa
Potri.001G457000 0.5kb upstream 0.5kb upstream 500 false Chr01: 49119847-49120346 Populus trichocarpa
Potri.001G457000 0.5kb downstream 0.5kb downstream 3804 true Chr01: 49116043-49119846 Populus trichocarpa
Potri.001G457000 0.5kb downstream 0.5kb downstream 500 false Chr01: 49116043-49116542 Populus trichocarpa
Potri.001G457000 1.0kb upstream 1.0kb upstream 4304 true Chr01: 49116543-49120846 Populus trichocarpa
Potri.001G457000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49119847-49120846 Populus trichocarpa
Potri.001G457000 1.0kb downstream 1.0kb downstream 4304 true Chr01: 49115543-49119846 Populus trichocarpa
Potri.001G457000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49115543-49116542 Populus trichocarpa
Potri.001G457000 2.0kb upstream 2.0kb upstream 5304 true Chr01: 49116543-49121846 Populus trichocarpa
Potri.001G457000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49119847-49121846 Populus trichocarpa
Potri.001G457000 2.0kb downstream 2.0kb downstream 5304 true Chr01: 49114543-49119846 Populus trichocarpa
Potri.001G457000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49114543-49116542 Populus trichocarpa
Potri.001G457000 5.0kb upstream 5.0kb upstream 8304 true Chr01: 49116543-49124846 Populus trichocarpa
Potri.001G457000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49119847-49124846 Populus trichocarpa
Potri.001G457000 5.0kb downstream 5.0kb downstream 8304 true Chr01: 49111543-49119846 Populus trichocarpa
Potri.001G457000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49111543-49116542 Populus trichocarpa
Potri.001G457000 10.0kb upstream 10.0kb upstream 13304 true Chr01: 49116543-49129846 Populus trichocarpa
Potri.001G457000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49119847-49129846 Populus trichocarpa
Potri.001G457000 10.0kb downstream 10.0kb downstream 13304 true Chr01: 49106543-49119846 Populus trichocarpa
Potri.001G457000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49106543-49116542 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.471        
cufflinks 4.842        
cufflinks 8.864        
cufflinks 0.226       Low
cufflinks 14.394     High  
cufflinks 0.646        
cufflinks 18.212     High  
cufflinks 14.828     High  
cufflinks 2.032        
cufflinks 0.772        
cufflinks 15.622     High  
cufflinks 0.207       Low
cufflinks 37.252     High High
cufflinks 0.116     Low Low
cufflinks 0.517        
cufflinks 0.936        
cufflinks 6.115        
cufflinks 6.812        
cufflinks 24.354     High  
cufflinks 29.584     High High
cufflinks 0.058     Low Low
cufflinks 5.245        
cufflinks 86.906     High High
cufflinks 30.704     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.013     Low Low

0 Strain