Gene : Potri.002G162100 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR30566//PTHR30566:SF5 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL // MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL Genomic Order:  1621
Name:  ? Potri.002G162100 Secondary Identifier:  ? PAC:27019951
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G162100 0.5kb upstream 0.5kb upstream 4583 true Chr02: 12243107-12247689 Populus trichocarpa
Potri.002G162100 0.5kb upstream 0.5kb upstream 500 false Chr02: 12243107-12243606 Populus trichocarpa
Potri.002G162100 0.5kb downstream 0.5kb downstream 4583 true Chr02: 12243607-12248189 Populus trichocarpa
Potri.002G162100 0.5kb downstream 0.5kb downstream 500 false Chr02: 12247690-12248189 Populus trichocarpa
Potri.002G162100 1.0kb upstream 1.0kb upstream 5083 true Chr02: 12242607-12247689 Populus trichocarpa
Potri.002G162100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12242607-12243606 Populus trichocarpa
Potri.002G162100 1.0kb downstream 1.0kb downstream 5083 true Chr02: 12243607-12248689 Populus trichocarpa
Potri.002G162100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12247690-12248689 Populus trichocarpa
Potri.002G162100 2.0kb upstream 2.0kb upstream 6083 true Chr02: 12241607-12247689 Populus trichocarpa
Potri.002G162100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12241607-12243606 Populus trichocarpa
Potri.002G162100 2.0kb downstream 2.0kb downstream 6083 true Chr02: 12243607-12249689 Populus trichocarpa
Potri.002G162100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12247690-12249689 Populus trichocarpa
Potri.002G162100 5.0kb upstream 5.0kb upstream 9083 true Chr02: 12238607-12247689 Populus trichocarpa
Potri.002G162100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12238607-12243606 Populus trichocarpa
Potri.002G162100 5.0kb downstream 5.0kb downstream 9083 true Chr02: 12243607-12252689 Populus trichocarpa
Potri.002G162100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12247690-12252689 Populus trichocarpa
Potri.002G162100 10.0kb upstream 10.0kb upstream 14083 true Chr02: 12233607-12247689 Populus trichocarpa
Potri.002G162100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12233607-12243606 Populus trichocarpa
Potri.002G162100 10.0kb downstream 10.0kb downstream 14083 true Chr02: 12243607-12257689 Populus trichocarpa
Potri.002G162100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12247690-12257689 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.099        
cufflinks 1.133        
cufflinks 5.565       High
cufflinks 1.309        
cufflinks 2.992        
cufflinks 6.963       High
cufflinks 0.249       Low
cufflinks 0.519       Low
cufflinks 6.044       High
cufflinks 0.748        
cufflinks 4.482        
cufflinks 0.894        
cufflinks 0.342       Low
cufflinks 4.665        
cufflinks 1.954        
cufflinks 2.242        
cufflinks 6.374       High
cufflinks 1.788        
cufflinks 5.674       High
cufflinks 1.225        
cufflinks 3.756        
cufflinks 1.449        
cufflinks 0.855        
cufflinks 1.64        
cufflinks 0.064     Low Low
cufflinks 0.11     Low Low
cufflinks 0.333     Low  
cufflinks 0.405     Low  
cufflinks 0.299     Low  
cufflinks 0.137     Low Low

0 Strain