Gene : Potri.002G140400 P. trichocarpa v3.0
Defline:  (1 of 3) K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Genomic Order:  1404
Name:  ? Potri.002G140400 Secondary Identifier:  ? PAC:27022626
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G140400 0.5kb upstream 0.5kb upstream 2646 true Chr02: 10435176-10437821 Populus trichocarpa
Potri.002G140400 0.5kb upstream 0.5kb upstream 500 false Chr02: 10435176-10435675 Populus trichocarpa
Potri.002G140400 0.5kb downstream 0.5kb downstream 2646 true Chr02: 10435676-10438321 Populus trichocarpa
Potri.002G140400 0.5kb downstream 0.5kb downstream 500 false Chr02: 10437822-10438321 Populus trichocarpa
Potri.002G140400 1.0kb upstream 1.0kb upstream 3146 true Chr02: 10434676-10437821 Populus trichocarpa
Potri.002G140400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10434676-10435675 Populus trichocarpa
Potri.002G140400 1.0kb downstream 1.0kb downstream 3146 true Chr02: 10435676-10438821 Populus trichocarpa
Potri.002G140400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10437822-10438821 Populus trichocarpa
Potri.002G140400 2.0kb upstream 2.0kb upstream 4146 true Chr02: 10433676-10437821 Populus trichocarpa
Potri.002G140400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10433676-10435675 Populus trichocarpa
Potri.002G140400 2.0kb downstream 2.0kb downstream 4146 true Chr02: 10435676-10439821 Populus trichocarpa
Potri.002G140400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10437822-10439821 Populus trichocarpa
Potri.002G140400 5.0kb upstream 5.0kb upstream 7146 true Chr02: 10430676-10437821 Populus trichocarpa
Potri.002G140400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10430676-10435675 Populus trichocarpa
Potri.002G140400 5.0kb downstream 5.0kb downstream 7146 true Chr02: 10435676-10442821 Populus trichocarpa
Potri.002G140400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10437822-10442821 Populus trichocarpa
Potri.002G140400 10.0kb upstream 10.0kb upstream 12146 true Chr02: 10425676-10437821 Populus trichocarpa
Potri.002G140400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10425676-10435675 Populus trichocarpa
Potri.002G140400 10.0kb downstream 10.0kb downstream 12146 true Chr02: 10435676-10447821 Populus trichocarpa
Potri.002G140400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10437822-10447821 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.953     High  
cufflinks 66.936     High  
cufflinks 106.884     High High
cufflinks 56.119     High  
cufflinks 52.693     High  
cufflinks 49.639     High Low
cufflinks 118.168     High High
cufflinks 32.255     High Low
cufflinks 70.48     High  
cufflinks 76.183     High  
cufflinks 68.297     High  
cufflinks 79.937     High  
cufflinks 59.074     High  
cufflinks 77.817     High  
cufflinks 61.897     High  
cufflinks 87.039     High  
cufflinks 42.421     High Low
cufflinks 46.652     High Low
cufflinks 74.665     High  
cufflinks 75.81     High  
cufflinks 103.717     High High
cufflinks 66.544     High  
cufflinks 74.838     High  
cufflinks 75.336     High  
cufflinks 76.96     High  
cufflinks 52.069     High  
cufflinks 59.15     High  
cufflinks 122.708     High  
cufflinks 177.547     High High
cufflinks 60.356     High  

0 Strain