Gene : Potri.002G107800 P. trichocarpa v3.0
Defline:  (1 of 3) 1.2.1.70 - Glutamyl-tRNA reductase Genomic Order:  1078
Name:  ? Potri.002G107800 Secondary Identifier:  ? PAC:27024106
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5918 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5188 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G107800 0.5kb upstream 0.5kb upstream 4344 true Chr02: 7909086-7913429 Populus trichocarpa
Potri.002G107800 0.5kb upstream 0.5kb upstream 500 false Chr02: 7909086-7909585 Populus trichocarpa
Potri.002G107800 0.5kb downstream 0.5kb downstream 4344 true Chr02: 7909586-7913929 Populus trichocarpa
Potri.002G107800 0.5kb downstream 0.5kb downstream 500 false Chr02: 7913430-7913929 Populus trichocarpa
Potri.002G107800 1.0kb upstream 1.0kb upstream 4844 true Chr02: 7908586-7913429 Populus trichocarpa
Potri.002G107800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7908586-7909585 Populus trichocarpa
Potri.002G107800 1.0kb downstream 1.0kb downstream 4844 true Chr02: 7909586-7914429 Populus trichocarpa
Potri.002G107800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7913430-7914429 Populus trichocarpa
Potri.002G107800 2.0kb upstream 2.0kb upstream 5844 true Chr02: 7907586-7913429 Populus trichocarpa
Potri.002G107800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7907586-7909585 Populus trichocarpa
Potri.002G107800 2.0kb downstream 2.0kb downstream 5844 true Chr02: 7909586-7915429 Populus trichocarpa
Potri.002G107800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7913430-7915429 Populus trichocarpa
Potri.002G107800 5.0kb upstream 5.0kb upstream 8844 true Chr02: 7904586-7913429 Populus trichocarpa
Potri.002G107800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7904586-7909585 Populus trichocarpa
Potri.002G107800 5.0kb downstream 5.0kb downstream 8844 true Chr02: 7909586-7918429 Populus trichocarpa
Potri.002G107800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7913430-7918429 Populus trichocarpa
Potri.002G107800 10.0kb upstream 10.0kb upstream 13844 true Chr02: 7899586-7913429 Populus trichocarpa
Potri.002G107800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7899586-7909585 Populus trichocarpa
Potri.002G107800 10.0kb downstream 10.0kb downstream 13844 true Chr02: 7909586-7923429 Populus trichocarpa
Potri.002G107800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7913430-7923429 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.768     High  
cufflinks 107.715     High High
cufflinks 10.756     High  
cufflinks 13.751     High  
cufflinks 11.56     High  
cufflinks 54.551     High  
cufflinks 15.103     High  
cufflinks 18.268     High  
cufflinks 22.733     High  
cufflinks 66.556     High  
cufflinks 18.069     High  
cufflinks 104.7     High High
cufflinks 8.434       Low
cufflinks 104.434     High High
cufflinks 130.986     High High
cufflinks 9.786       Low
cufflinks 8.888       Low
cufflinks 11.46     High  
cufflinks 149.476     High High
cufflinks 22.462     High  
cufflinks 26.468     High  
cufflinks 71.682     High  
cufflinks 15.463     High  
cufflinks 30.63     High  
cufflinks 14.415        
cufflinks 57.286     High High
cufflinks 64.228     High High
cufflinks 24.686        
cufflinks 26.647        
cufflinks 25.09        

0 Strain