Gene : Potri.009G054100 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR11933//PTHR11933:SF5 - TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE // MITOCHONDRIAL TRNA-SPECIFIC 2-THIOURIDYLASE 1 Genomic Order:  541
Name:  ? Potri.009G054100 Secondary Identifier:  ? PAC:26986690
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G054100 0.5kb upstream 0.5kb upstream 1028 true Chr09: 5782632-5783659 Populus trichocarpa
Potri.009G054100 0.5kb upstream 0.5kb upstream 500 false Chr09: 5782632-5783131 Populus trichocarpa
Potri.009G054100 0.5kb downstream 0.5kb downstream 1028 true Chr09: 5783132-5784159 Populus trichocarpa
Potri.009G054100 0.5kb downstream 0.5kb downstream 500 false Chr09: 5783660-5784159 Populus trichocarpa
Potri.009G054100 1.0kb upstream 1.0kb upstream 1528 true Chr09: 5782132-5783659 Populus trichocarpa
Potri.009G054100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5782132-5783131 Populus trichocarpa
Potri.009G054100 1.0kb downstream 1.0kb downstream 1528 true Chr09: 5783132-5784659 Populus trichocarpa
Potri.009G054100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5783660-5784659 Populus trichocarpa
Potri.009G054100 2.0kb upstream 2.0kb upstream 2528 true Chr09: 5781132-5783659 Populus trichocarpa
Potri.009G054100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5781132-5783131 Populus trichocarpa
Potri.009G054100 2.0kb downstream 2.0kb downstream 2528 true Chr09: 5783132-5785659 Populus trichocarpa
Potri.009G054100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5783660-5785659 Populus trichocarpa
Potri.009G054100 5.0kb upstream 5.0kb upstream 5528 true Chr09: 5778132-5783659 Populus trichocarpa
Potri.009G054100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5778132-5783131 Populus trichocarpa
Potri.009G054100 5.0kb downstream 5.0kb downstream 5528 true Chr09: 5783132-5788659 Populus trichocarpa
Potri.009G054100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5783660-5788659 Populus trichocarpa
Potri.009G054100 10.0kb upstream 10.0kb upstream 10528 true Chr09: 5773132-5783659 Populus trichocarpa
Potri.009G054100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5773132-5783131 Populus trichocarpa
Potri.009G054100 10.0kb downstream 10.0kb downstream 10528 true Chr09: 5783132-5793659 Populus trichocarpa
Potri.009G054100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5783660-5793659 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.52        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.303     Low  
cufflinks 0.14     Low  
cufflinks 0.153     Low  
cufflinks 0.334     Low  

0 Strain