Gene : Potri.004G219000 P. trichocarpa v3.0
Defline:  (1 of 2) K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) Genomic Order:  2190
Name:  ? Potri.004G219000 Secondary Identifier:  ? PAC:26991397
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G219000 0.5kb upstream 0.5kb upstream 5059 true Chr04: 22557167-22562225 Populus trichocarpa
Potri.004G219000 0.5kb upstream 0.5kb upstream 500 false Chr04: 22557167-22557666 Populus trichocarpa
Potri.004G219000 0.5kb downstream 0.5kb downstream 5059 true Chr04: 22557667-22562725 Populus trichocarpa
Potri.004G219000 0.5kb downstream 0.5kb downstream 500 false Chr04: 22562226-22562725 Populus trichocarpa
Potri.004G219000 1.0kb upstream 1.0kb upstream 5559 true Chr04: 22556667-22562225 Populus trichocarpa
Potri.004G219000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 22556667-22557666 Populus trichocarpa
Potri.004G219000 1.0kb downstream 1.0kb downstream 5559 true Chr04: 22557667-22563225 Populus trichocarpa
Potri.004G219000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 22562226-22563225 Populus trichocarpa
Potri.004G219000 2.0kb upstream 2.0kb upstream 6559 true Chr04: 22555667-22562225 Populus trichocarpa
Potri.004G219000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 22555667-22557666 Populus trichocarpa
Potri.004G219000 2.0kb downstream 2.0kb downstream 6559 true Chr04: 22557667-22564225 Populus trichocarpa
Potri.004G219000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 22562226-22564225 Populus trichocarpa
Potri.004G219000 5.0kb upstream 5.0kb upstream 9559 true Chr04: 22552667-22562225 Populus trichocarpa
Potri.004G219000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 22552667-22557666 Populus trichocarpa
Potri.004G219000 5.0kb downstream 5.0kb downstream 9559 true Chr04: 22557667-22567225 Populus trichocarpa
Potri.004G219000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 22562226-22567225 Populus trichocarpa
Potri.004G219000 10.0kb upstream 10.0kb upstream 14559 true Chr04: 22547667-22562225 Populus trichocarpa
Potri.004G219000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 22547667-22557666 Populus trichocarpa
Potri.004G219000 10.0kb downstream 10.0kb downstream 14559 true Chr04: 22557667-22572225 Populus trichocarpa
Potri.004G219000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 22562226-22572225 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.268        
cufflinks 3.898        
cufflinks 3.264        
cufflinks 3.433        
cufflinks 5.11       High
cufflinks 4.326        
cufflinks 4.169        
cufflinks 5.752       High
cufflinks 3.782        
cufflinks 3.386        
cufflinks 4.996       High
cufflinks 4.886       High
cufflinks 4.871       High
cufflinks 3.88        
cufflinks 4.889       High
cufflinks 3.447        
cufflinks 3.243        
cufflinks 3.422        
cufflinks 2.044       Low
cufflinks 3.023       Low
cufflinks 4.125        
cufflinks 4.571        
cufflinks 3.546        
cufflinks 3.978        
cufflinks 16.372        
cufflinks 17.186        
cufflinks 8.78       Low
cufflinks 12.312        
cufflinks 14.947        
cufflinks 29.544     High High

0 Strain