Gene : Potri.003G221100 P. trichocarpa v3.0
Defline:  (1 of 1) 3.4.22.52 - Calpain-1 / Mu-calpain Genomic Order:  2211
Name:  ? Potri.003G221100 Secondary Identifier:  ? PAC:26997928
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G221100 0.5kb upstream 0.5kb upstream 16216   true Chr03: 21601987-21618202 Populus trichocarpa
Potri.003G221100 0.5kb upstream 0.5kb upstream 500   false Chr03: 21617703-21618202 Populus trichocarpa
Potri.003G221100 0.5kb downstream 0.5kb downstream 16216   true Chr03: 21601487-21617702 Populus trichocarpa
Potri.003G221100 0.5kb downstream 0.5kb downstream 500   false Chr03: 21601487-21601986 Populus trichocarpa
Potri.003G221100 1.0kb upstream 1.0kb upstream 16716   true Chr03: 21601987-21618702 Populus trichocarpa
Potri.003G221100 1.0kb upstream 1.0kb upstream 1000   false Chr03: 21617703-21618702 Populus trichocarpa
Potri.003G221100 1.0kb downstream 1.0kb downstream 16716   true Chr03: 21600987-21617702 Populus trichocarpa
Potri.003G221100 1.0kb downstream 1.0kb downstream 1000   false Chr03: 21600987-21601986 Populus trichocarpa
Potri.003G221100 2.0kb upstream 2.0kb upstream 17716   true Chr03: 21601987-21619702 Populus trichocarpa
Potri.003G221100 2.0kb upstream 2.0kb upstream 2000   false Chr03: 21617703-21619702 Populus trichocarpa
Potri.003G221100 2.0kb downstream 2.0kb downstream 17716   true Chr03: 21599987-21617702 Populus trichocarpa
Potri.003G221100 2.0kb downstream 2.0kb downstream 2000   false Chr03: 21599987-21601986 Populus trichocarpa
Potri.003G221100 5.0kb upstream 5.0kb upstream 20716   true Chr03: 21601987-21622702 Populus trichocarpa
Potri.003G221100 5.0kb upstream 5.0kb upstream 5000   false Chr03: 21617703-21622702 Populus trichocarpa
Potri.003G221100 5.0kb downstream 5.0kb downstream 20716   true Chr03: 21596987-21617702 Populus trichocarpa
Potri.003G221100 5.0kb downstream 5.0kb downstream 5000   false Chr03: 21596987-21601986 Populus trichocarpa
Potri.003G221100 10.0kb upstream 10.0kb upstream 25716   true Chr03: 21601987-21627702 Populus trichocarpa
Potri.003G221100 10.0kb upstream 10.0kb upstream 10000   false Chr03: 21617703-21627702 Populus trichocarpa
Potri.003G221100 10.0kb downstream 10.0kb downstream 25716   true Chr03: 21591987-21617702 Populus trichocarpa
Potri.003G221100 10.0kb downstream 10.0kb downstream 10000   false Chr03: 21591987-21601986 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.305        
cufflinks 1.742        
cufflinks 1.661        
cufflinks 0.909       Low
cufflinks 1.104        
cufflinks 3.055       High
cufflinks 1.519        
cufflinks 3.586       High
cufflinks 0.712       Low
cufflinks 1.056        
cufflinks 1.55        
cufflinks 2.241        
cufflinks 1.428        
cufflinks 1.88        
cufflinks 2.839       High
cufflinks 1.414        
cufflinks 1.078        
cufflinks 1.584        
cufflinks 0.84       Low
cufflinks 3.163       High
cufflinks 1.58        
cufflinks 1.524        
cufflinks 1.438        
cufflinks 1.24        
cufflinks 27.034        
cufflinks 28.782     High  
cufflinks 26.67     High  
cufflinks 32.199     High High
cufflinks 23.532        
cufflinks 33.425     High High

0 Strain