Gene : Potri.004G099500 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR34543:SF1 - ABSCISIC ACID (ABA)-DEFICIENT 4 PROTEIN Genomic Order:  995
Name:  ? Potri.004G099500 Secondary Identifier:  ? PAC:26990135
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6809 Populus trichocarpa pathologic  
Ptrichocarpa PWY-695 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G099500 0.5kb upstream 0.5kb upstream 4255 true Chr04: 8605666-8609920 Populus trichocarpa
Potri.004G099500 0.5kb upstream 0.5kb upstream 500 false Chr04: 8609421-8609920 Populus trichocarpa
Potri.004G099500 0.5kb downstream 0.5kb downstream 4255 true Chr04: 8605166-8609420 Populus trichocarpa
Potri.004G099500 0.5kb downstream 0.5kb downstream 500 false Chr04: 8605166-8605665 Populus trichocarpa
Potri.004G099500 1.0kb upstream 1.0kb upstream 4755 true Chr04: 8605666-8610420 Populus trichocarpa
Potri.004G099500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8609421-8610420 Populus trichocarpa
Potri.004G099500 1.0kb downstream 1.0kb downstream 4755 true Chr04: 8604666-8609420 Populus trichocarpa
Potri.004G099500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8604666-8605665 Populus trichocarpa
Potri.004G099500 2.0kb upstream 2.0kb upstream 5755 true Chr04: 8605666-8611420 Populus trichocarpa
Potri.004G099500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8609421-8611420 Populus trichocarpa
Potri.004G099500 2.0kb downstream 2.0kb downstream 5755 true Chr04: 8603666-8609420 Populus trichocarpa
Potri.004G099500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8603666-8605665 Populus trichocarpa
Potri.004G099500 5.0kb upstream 5.0kb upstream 8755 true Chr04: 8605666-8614420 Populus trichocarpa
Potri.004G099500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8609421-8614420 Populus trichocarpa
Potri.004G099500 5.0kb downstream 5.0kb downstream 8755 true Chr04: 8600666-8609420 Populus trichocarpa
Potri.004G099500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8600666-8605665 Populus trichocarpa
Potri.004G099500 10.0kb upstream 10.0kb upstream 13755 true Chr04: 8605666-8619420 Populus trichocarpa
Potri.004G099500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8609421-8619420 Populus trichocarpa
Potri.004G099500 10.0kb downstream 10.0kb downstream 13755 true Chr04: 8595666-8609420 Populus trichocarpa
Potri.004G099500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8595666-8605665 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.948        
cufflinks 2.5       Low
cufflinks 1.691       Low
cufflinks 2.157       Low
cufflinks 5.382        
cufflinks 2.101       Low
cufflinks 8.322       High
cufflinks 5.814        
cufflinks 4.288        
cufflinks 5.553        
cufflinks 7.596       High
cufflinks 9.988     High High
cufflinks 5.858        
cufflinks 2.914        
cufflinks 3.721        
cufflinks 4.732        
cufflinks 3.189        
cufflinks 7.715       High
cufflinks 2.463       Low
cufflinks 3.964        
cufflinks 4.552        
cufflinks 8.277       High
cufflinks 5.826        
cufflinks 2.364       Low
cufflinks 9.642       Low
cufflinks 25.399        
cufflinks 37.614     High High
cufflinks 21.285        
cufflinks 27.483        
cufflinks 17.432        

0 Strain