Gene : Potri.005G075700 P. trichocarpa v3.0
Defline:  (1 of 3) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase Genomic Order:  757
Name:  ? Potri.005G075700 Secondary Identifier:  ? PAC:27027832
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ASPARAGINESYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ASPARAGINE-BIOSYNTHESIS Populus trichocarpa pathologic  
Ptrichocarpa GLUTAMINDEG-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY0-1325 Populus trichocarpa pathologic  
Ptrichocarpa CITRULBIO-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G075700 0.5kb upstream 0.5kb upstream 6979 true Chr05: 5538777-5545755 Populus trichocarpa
Potri.005G075700 0.5kb upstream 0.5kb upstream 500 false Chr05: 5538777-5539276 Populus trichocarpa
Potri.005G075700 0.5kb downstream 0.5kb downstream 6979 true Chr05: 5539277-5546255 Populus trichocarpa
Potri.005G075700 0.5kb downstream 0.5kb downstream 500 false Chr05: 5545756-5546255 Populus trichocarpa
Potri.005G075700 1.0kb upstream 1.0kb upstream 7479 true Chr05: 5538277-5545755 Populus trichocarpa
Potri.005G075700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5538277-5539276 Populus trichocarpa
Potri.005G075700 1.0kb downstream 1.0kb downstream 7479 true Chr05: 5539277-5546755 Populus trichocarpa
Potri.005G075700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5545756-5546755 Populus trichocarpa
Potri.005G075700 2.0kb upstream 2.0kb upstream 8479 true Chr05: 5537277-5545755 Populus trichocarpa
Potri.005G075700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5537277-5539276 Populus trichocarpa
Potri.005G075700 2.0kb downstream 2.0kb downstream 8479 true Chr05: 5539277-5547755 Populus trichocarpa
Potri.005G075700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5545756-5547755 Populus trichocarpa
Potri.005G075700 5.0kb upstream 5.0kb upstream 11479 true Chr05: 5534277-5545755 Populus trichocarpa
Potri.005G075700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5534277-5539276 Populus trichocarpa
Potri.005G075700 5.0kb downstream 5.0kb downstream 11479 true Chr05: 5539277-5550755 Populus trichocarpa
Potri.005G075700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5545756-5550755 Populus trichocarpa
Potri.005G075700 10.0kb upstream 10.0kb upstream 16479 true Chr05: 5529277-5545755 Populus trichocarpa
Potri.005G075700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5529277-5539276 Populus trichocarpa
Potri.005G075700 10.0kb downstream 10.0kb downstream 16479 true Chr05: 5539277-5555755 Populus trichocarpa
Potri.005G075700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5545756-5555755 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.097       Low
cufflinks 6.055       High
cufflinks 3.263        
cufflinks 3.121        
cufflinks 4.21        
cufflinks 3.357        
cufflinks 5.263        
cufflinks 5.759        
cufflinks 3.945        
cufflinks 6.556       High
cufflinks 4.89        
cufflinks 5.363        
cufflinks 2.777       Low
cufflinks 6.416       High
cufflinks 5.424        
cufflinks 6.181       High
cufflinks 2.265       Low
cufflinks 2.453       Low
cufflinks 3.475        
cufflinks 4.615        
cufflinks 3.008        
cufflinks 6.619       High
cufflinks 5.397        
cufflinks 4.701        
cufflinks 32.751     High  
cufflinks 12.131       Low
cufflinks 15.8       Low
cufflinks 28.105        
cufflinks 37.767     High  
cufflinks 15.746       Low

0 Strain