Gene : Potri.T041400 P. trichocarpa v3.0
Defline:  (1 of 5) PF04683 - Proteasome complex subunit Rpn13 ubiquitin receptor (Proteasom_Rpn13) Genomic Order:  9
Name:  ? Potri.T041400 Secondary Identifier:  ? PAC:27051353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T041400 0.5kb upstream 0.5kb upstream 2211 true scaffold_39: 200737-202947 Populus trichocarpa
Potri.T041400 0.5kb upstream 0.5kb upstream 500 false scaffold_39: 202448-202947 Populus trichocarpa
Potri.T041400 0.5kb downstream 0.5kb downstream 2211 true scaffold_39: 200237-202447 Populus trichocarpa
Potri.T041400 0.5kb downstream 0.5kb downstream 500 false scaffold_39: 200237-200736 Populus trichocarpa
Potri.T041400 1.0kb upstream 1.0kb upstream 2711 true scaffold_39: 200737-203447 Populus trichocarpa
Potri.T041400 1.0kb upstream 1.0kb upstream 1000 false scaffold_39: 202448-203447 Populus trichocarpa
Potri.T041400 1.0kb downstream 1.0kb downstream 2711 true scaffold_39: 199737-202447 Populus trichocarpa
Potri.T041400 1.0kb downstream 1.0kb downstream 1000 false scaffold_39: 199737-200736 Populus trichocarpa
Potri.T041400 2.0kb upstream 2.0kb upstream 3711 true scaffold_39: 200737-204447 Populus trichocarpa
Potri.T041400 2.0kb upstream 2.0kb upstream 2000 false scaffold_39: 202448-204447 Populus trichocarpa
Potri.T041400 2.0kb downstream 2.0kb downstream 3711 true scaffold_39: 198737-202447 Populus trichocarpa
Potri.T041400 2.0kb downstream 2.0kb downstream 2000 false scaffold_39: 198737-200736 Populus trichocarpa
Potri.T041400 5.0kb upstream 5.0kb upstream 6711 true scaffold_39: 200737-207447 Populus trichocarpa
Potri.T041400 5.0kb upstream 5.0kb upstream 5000 false scaffold_39: 202448-207447 Populus trichocarpa
Potri.T041400 5.0kb downstream 5.0kb downstream 6711 true scaffold_39: 195737-202447 Populus trichocarpa
Potri.T041400 5.0kb downstream 5.0kb downstream 5000 false scaffold_39: 195737-200736 Populus trichocarpa
Potri.T041400 10.0kb upstream 10.0kb upstream 11711 true scaffold_39: 200737-212447 Populus trichocarpa
Potri.T041400 10.0kb upstream 10.0kb upstream 10000 false scaffold_39: 202448-212447 Populus trichocarpa
Potri.T041400 10.0kb downstream 10.0kb downstream 11711 true scaffold_39: 190737-202447 Populus trichocarpa
Potri.T041400 10.0kb downstream 10.0kb downstream 10000 false scaffold_39: 190737-200736 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.005     Low Low
cufflinks 0.041     Low  
cufflinks 0.073     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.077     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain