Gene : Potri.006G194400 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR13009:SF8 - AHSA1 PROTEIN Genomic Order:  1944
Name:  ? Potri.006G194400 Secondary Identifier:  ? PAC:27005448
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G194400 0.5kb upstream 0.5kb upstream 2411 true Chr06: 20944100-20946510 Populus trichocarpa
Potri.006G194400 0.5kb upstream 0.5kb upstream 500 false Chr06: 20944100-20944599 Populus trichocarpa
Potri.006G194400 0.5kb downstream 0.5kb downstream 2411 true Chr06: 20944600-20947010 Populus trichocarpa
Potri.006G194400 0.5kb downstream 0.5kb downstream 500 false Chr06: 20946511-20947010 Populus trichocarpa
Potri.006G194400 1.0kb upstream 1.0kb upstream 2911 true Chr06: 20943600-20946510 Populus trichocarpa
Potri.006G194400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20943600-20944599 Populus trichocarpa
Potri.006G194400 1.0kb downstream 1.0kb downstream 2911 true Chr06: 20944600-20947510 Populus trichocarpa
Potri.006G194400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20946511-20947510 Populus trichocarpa
Potri.006G194400 2.0kb upstream 2.0kb upstream 3911 true Chr06: 20942600-20946510 Populus trichocarpa
Potri.006G194400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20942600-20944599 Populus trichocarpa
Potri.006G194400 2.0kb downstream 2.0kb downstream 3911 true Chr06: 20944600-20948510 Populus trichocarpa
Potri.006G194400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20946511-20948510 Populus trichocarpa
Potri.006G194400 5.0kb upstream 5.0kb upstream 6911 true Chr06: 20939600-20946510 Populus trichocarpa
Potri.006G194400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20939600-20944599 Populus trichocarpa
Potri.006G194400 5.0kb downstream 5.0kb downstream 6911 true Chr06: 20944600-20951510 Populus trichocarpa
Potri.006G194400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20946511-20951510 Populus trichocarpa
Potri.006G194400 10.0kb upstream 10.0kb upstream 11911 true Chr06: 20934600-20946510 Populus trichocarpa
Potri.006G194400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20934600-20944599 Populus trichocarpa
Potri.006G194400 10.0kb downstream 10.0kb downstream 11911 true Chr06: 20944600-20956510 Populus trichocarpa
Potri.006G194400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20946511-20956510 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.171     High  
cufflinks 20.477     High  
cufflinks 21.995     High  
cufflinks 25.865     High  
cufflinks 18.38     High Low
cufflinks 22.109     High  
cufflinks 30.768     High  
cufflinks 23.85     High  
cufflinks 32.439     High  
cufflinks 24.636     High  
cufflinks 23.915     High  
cufflinks 26.684     High  
cufflinks 22.987     High  
cufflinks 35.23     High  
cufflinks 22.67     High  
cufflinks 25.704     High  
cufflinks 20.325     High  
cufflinks 76.566     High High
cufflinks 27.533     High  
cufflinks 77.705     High High
cufflinks 26.765     High  
cufflinks 24.955     High  
cufflinks 36.648     High  
cufflinks 32.435     High  
cufflinks 14.047        
cufflinks 18.776        
cufflinks 21.576        
cufflinks 16.761        
cufflinks 29.963     High High
cufflinks 14.101        

0 Strain