Gene : Potri.009G077800 P. trichocarpa v3.0
Defline:  (1 of 1) K00645 - [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] (fabD) Genomic Order:  778
Name:  ? Potri.009G077800 Secondary Identifier:  ? PAC:26987010
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7388 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4381 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5156 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G077800 0.5kb upstream 0.5kb upstream 4023 true Chr09: 7474509-7478531 Populus trichocarpa
Potri.009G077800 0.5kb upstream 0.5kb upstream 500 false Chr09: 7478032-7478531 Populus trichocarpa
Potri.009G077800 0.5kb downstream 0.5kb downstream 4023 true Chr09: 7474009-7478031 Populus trichocarpa
Potri.009G077800 0.5kb downstream 0.5kb downstream 500 false Chr09: 7474009-7474508 Populus trichocarpa
Potri.009G077800 1.0kb upstream 1.0kb upstream 4523 true Chr09: 7474509-7479031 Populus trichocarpa
Potri.009G077800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7478032-7479031 Populus trichocarpa
Potri.009G077800 1.0kb downstream 1.0kb downstream 4523 true Chr09: 7473509-7478031 Populus trichocarpa
Potri.009G077800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7473509-7474508 Populus trichocarpa
Potri.009G077800 2.0kb upstream 2.0kb upstream 5523 true Chr09: 7474509-7480031 Populus trichocarpa
Potri.009G077800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7478032-7480031 Populus trichocarpa
Potri.009G077800 2.0kb downstream 2.0kb downstream 5523 true Chr09: 7472509-7478031 Populus trichocarpa
Potri.009G077800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7472509-7474508 Populus trichocarpa
Potri.009G077800 5.0kb upstream 5.0kb upstream 8523 true Chr09: 7474509-7483031 Populus trichocarpa
Potri.009G077800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7478032-7483031 Populus trichocarpa
Potri.009G077800 5.0kb downstream 5.0kb downstream 8523 true Chr09: 7469509-7478031 Populus trichocarpa
Potri.009G077800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7469509-7474508 Populus trichocarpa
Potri.009G077800 10.0kb upstream 10.0kb upstream 13523 true Chr09: 7474509-7488031 Populus trichocarpa
Potri.009G077800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7478032-7488031 Populus trichocarpa
Potri.009G077800 10.0kb downstream 10.0kb downstream 13523 true Chr09: 7464509-7478031 Populus trichocarpa
Potri.009G077800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7464509-7474508 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.99        
cufflinks 3.398        
cufflinks 9.172     High High
cufflinks 2.288       Low
cufflinks 1.219       Low
cufflinks 3.793        
cufflinks 3.11        
cufflinks 4.142        
cufflinks 8.008       High
cufflinks 3.516        
cufflinks 7.161        
cufflinks 7.055        
cufflinks 2.729        
cufflinks 3.986        
cufflinks 2.562       Low
cufflinks 3.571        
cufflinks 6.499        
cufflinks 2.316       Low
cufflinks 3.738        
cufflinks 8.245       High
cufflinks 4.307        
cufflinks 5.346        
cufflinks 7.156        
cufflinks 6.404        
cufflinks 6.917        
cufflinks 5.751        
cufflinks 9.319        
cufflinks 10.804        
cufflinks 15.411       High
cufflinks 5.923        

0 Strain