Gene : Potri.009G078600 P. trichocarpa v3.0
Defline:  (1 of 1) KOG2449//KOG2450//KOG2451 - Methylmalonate semialdehyde dehydrogenase // Aldehyde dehydrogenase // Aldehyde dehydrogenase Genomic Order:  786
Name:  ? Potri.009G078600 Secondary Identifier:  ? PAC:26986546
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa VALDEG-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G078600 0.5kb upstream 0.5kb upstream 6226 true Chr09: 7544395-7550620 Populus trichocarpa
Potri.009G078600 0.5kb upstream 0.5kb upstream 500 false Chr09: 7550121-7550620 Populus trichocarpa
Potri.009G078600 0.5kb downstream 0.5kb downstream 6226 true Chr09: 7543895-7550120 Populus trichocarpa
Potri.009G078600 0.5kb downstream 0.5kb downstream 500 false Chr09: 7543895-7544394 Populus trichocarpa
Potri.009G078600 1.0kb upstream 1.0kb upstream 6726 true Chr09: 7544395-7551120 Populus trichocarpa
Potri.009G078600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7550121-7551120 Populus trichocarpa
Potri.009G078600 1.0kb downstream 1.0kb downstream 6726 true Chr09: 7543395-7550120 Populus trichocarpa
Potri.009G078600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7543395-7544394 Populus trichocarpa
Potri.009G078600 2.0kb upstream 2.0kb upstream 7726 true Chr09: 7544395-7552120 Populus trichocarpa
Potri.009G078600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7550121-7552120 Populus trichocarpa
Potri.009G078600 2.0kb downstream 2.0kb downstream 7726 true Chr09: 7542395-7550120 Populus trichocarpa
Potri.009G078600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7542395-7544394 Populus trichocarpa
Potri.009G078600 5.0kb upstream 5.0kb upstream 10726 true Chr09: 7544395-7555120 Populus trichocarpa
Potri.009G078600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7550121-7555120 Populus trichocarpa
Potri.009G078600 5.0kb downstream 5.0kb downstream 10726 true Chr09: 7539395-7550120 Populus trichocarpa
Potri.009G078600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7539395-7544394 Populus trichocarpa
Potri.009G078600 10.0kb upstream 10.0kb upstream 15726 true Chr09: 7544395-7560120 Populus trichocarpa
Potri.009G078600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7550121-7560120 Populus trichocarpa
Potri.009G078600 10.0kb downstream 10.0kb downstream 15726 true Chr09: 7534395-7550120 Populus trichocarpa
Potri.009G078600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7534395-7544394 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.384       High
cufflinks 1.049       Low
cufflinks 1.942        
cufflinks 2.378        
cufflinks 13.108     High High
cufflinks 0.992       Low
cufflinks 1.92        
cufflinks 3.145        
cufflinks 2.993        
cufflinks 2.629        
cufflinks 0.961       Low
cufflinks 2.01        
cufflinks 1.415        
cufflinks 2.004        
cufflinks 2.004        
cufflinks 1.159        
cufflinks 2.417        
cufflinks 2.175        
cufflinks 1.223        
cufflinks 1.832        
cufflinks 2.435        
cufflinks 5.041       High
cufflinks 2.152        
cufflinks 1.272        
cufflinks 82.342     High  
cufflinks 87.935     High  
cufflinks 68.835     High  
cufflinks 100.301     High  
cufflinks 66.371     High  
cufflinks 76.488     High  

0 Strain