Gene : Potri.015G017500 P. trichocarpa v3.0
Defline:  (1 of 2) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  175
Name:  ? Potri.015G017500 Secondary Identifier:  ? PAC:27018546
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLUGLNSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6963 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3282 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G017500 0.5kb upstream 0.5kb upstream 11924 true Chr15: 1268251-1280174 Populus trichocarpa
Potri.015G017500 0.5kb upstream 0.5kb upstream 500 false Chr15: 1268251-1268750 Populus trichocarpa
Potri.015G017500 0.5kb downstream 0.5kb downstream 11924 true Chr15: 1268751-1280674 Populus trichocarpa
Potri.015G017500 0.5kb downstream 0.5kb downstream 500 false Chr15: 1280175-1280674 Populus trichocarpa
Potri.015G017500 1.0kb upstream 1.0kb upstream 12424 true Chr15: 1267751-1280174 Populus trichocarpa
Potri.015G017500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1267751-1268750 Populus trichocarpa
Potri.015G017500 1.0kb downstream 1.0kb downstream 12424 true Chr15: 1268751-1281174 Populus trichocarpa
Potri.015G017500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1280175-1281174 Populus trichocarpa
Potri.015G017500 2.0kb upstream 2.0kb upstream 13424 true Chr15: 1266751-1280174 Populus trichocarpa
Potri.015G017500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1266751-1268750 Populus trichocarpa
Potri.015G017500 2.0kb downstream 2.0kb downstream 13424 true Chr15: 1268751-1282174 Populus trichocarpa
Potri.015G017500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1280175-1282174 Populus trichocarpa
Potri.015G017500 5.0kb upstream 5.0kb upstream 16424 true Chr15: 1263751-1280174 Populus trichocarpa
Potri.015G017500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1263751-1268750 Populus trichocarpa
Potri.015G017500 5.0kb downstream 5.0kb downstream 16424 true Chr15: 1268751-1285174 Populus trichocarpa
Potri.015G017500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1280175-1285174 Populus trichocarpa
Potri.015G017500 10.0kb upstream 10.0kb upstream 21424 true Chr15: 1258751-1280174 Populus trichocarpa
Potri.015G017500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1258751-1268750 Populus trichocarpa
Potri.015G017500 10.0kb downstream 10.0kb downstream 21424 true Chr15: 1268751-1290174 Populus trichocarpa
Potri.015G017500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1280175-1290174 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.716     High  
cufflinks 2.983       Low
cufflinks 10.842     High  
cufflinks 9.151        
cufflinks 5.219        
cufflinks 4.147        
cufflinks 3.742        
cufflinks 20.206     High High
cufflinks 10.54     High  
cufflinks 15.111     High High
cufflinks 10.381        
cufflinks 6.431        
cufflinks 13.884     High  
cufflinks 5.958        
cufflinks 5.297        
cufflinks 3.456       Low
cufflinks 0.917       Low
cufflinks 2.889       Low
cufflinks 9.04        
cufflinks 12.106     High  
cufflinks 8.997        
cufflinks 10.009     High  
cufflinks 16.615     High High
cufflinks 16.793     High High
cufflinks 47.403     High  
cufflinks 51.068     High  
cufflinks 51.912     High  
cufflinks 54.584     High  
cufflinks 33.131     High Low
cufflinks 67.537     High  

0 Strain