Gene : Potri.010G248900 P. trichocarpa v3.0
Defline:  (1 of 2) K01866 - tyrosyl-tRNA synthetase (YARS, tyrS) Genomic Order:  2489
Name:  ? Potri.010G248900 Secondary Identifier:  ? PAC:26982753
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G248900 0.5kb upstream 0.5kb upstream 3869 true Chr10: 22210499-22214367 Populus trichocarpa
Potri.010G248900 0.5kb upstream 0.5kb upstream 500 false Chr10: 22213868-22214367 Populus trichocarpa
Potri.010G248900 0.5kb downstream 0.5kb downstream 3869 true Chr10: 22209999-22213867 Populus trichocarpa
Potri.010G248900 0.5kb downstream 0.5kb downstream 500 false Chr10: 22209999-22210498 Populus trichocarpa
Potri.010G248900 1.0kb upstream 1.0kb upstream 4369 true Chr10: 22210499-22214867 Populus trichocarpa
Potri.010G248900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 22213868-22214867 Populus trichocarpa
Potri.010G248900 1.0kb downstream 1.0kb downstream 4369 true Chr10: 22209499-22213867 Populus trichocarpa
Potri.010G248900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 22209499-22210498 Populus trichocarpa
Potri.010G248900 2.0kb upstream 2.0kb upstream 5369 true Chr10: 22210499-22215867 Populus trichocarpa
Potri.010G248900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 22213868-22215867 Populus trichocarpa
Potri.010G248900 2.0kb downstream 2.0kb downstream 5369 true Chr10: 22208499-22213867 Populus trichocarpa
Potri.010G248900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 22208499-22210498 Populus trichocarpa
Potri.010G248900 5.0kb upstream 5.0kb upstream 8369 true Chr10: 22210499-22218867 Populus trichocarpa
Potri.010G248900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 22213868-22218867 Populus trichocarpa
Potri.010G248900 5.0kb downstream 5.0kb downstream 8369 true Chr10: 22205499-22213867 Populus trichocarpa
Potri.010G248900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 22205499-22210498 Populus trichocarpa
Potri.010G248900 10.0kb upstream 10.0kb upstream 13369 true Chr10: 22210499-22223867 Populus trichocarpa
Potri.010G248900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 22213868-22223867 Populus trichocarpa
Potri.010G248900 10.0kb downstream 10.0kb downstream 13369 true Chr10: 22200499-22213867 Populus trichocarpa
Potri.010G248900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 22200499-22210498 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.469     High High
cufflinks 6.645       Low
cufflinks 8.95     High  
cufflinks 8.323        
cufflinks 9.162        
cufflinks 8.751        
cufflinks 9.886     High  
cufflinks 9.158        
cufflinks 7.992        
cufflinks 13.622     High High
cufflinks 11.353     High High
cufflinks 10.017     High  
cufflinks 9.27        
cufflinks 9.276     High  
cufflinks 6.796       Low
cufflinks 9.365     High  
cufflinks 9.091        
cufflinks 8.387     High  
cufflinks 8.55        
cufflinks 9.465        
cufflinks 8.727        
cufflinks 9.447        
cufflinks 9.955     High  
cufflinks 10.931     High High
cufflinks 38.649     High  
cufflinks 35.51     High  
cufflinks 34.901     High  
cufflinks 47.881     High  
cufflinks 51.593     High  
cufflinks 34.111     High  

0 Strain