Gene : Potri.015G076200 P. trichocarpa v3.0
Defline:  (1 of 2) K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Genomic Order:  762
Name:  ? Potri.015G076200 Secondary Identifier:  ? PAC:27017986
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7560 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G076200 0.5kb upstream 0.5kb upstream 5593 true Chr15: 10116938-10122530 Populus trichocarpa
Potri.015G076200 0.5kb upstream 0.5kb upstream 500 false Chr15: 10116938-10117437 Populus trichocarpa
Potri.015G076200 0.5kb downstream 0.5kb downstream 5593 true Chr15: 10117438-10123030 Populus trichocarpa
Potri.015G076200 0.5kb downstream 0.5kb downstream 500 false Chr15: 10122531-10123030 Populus trichocarpa
Potri.015G076200 1.0kb upstream 1.0kb upstream 6093 true Chr15: 10116438-10122530 Populus trichocarpa
Potri.015G076200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10116438-10117437 Populus trichocarpa
Potri.015G076200 1.0kb downstream 1.0kb downstream 6093 true Chr15: 10117438-10123530 Populus trichocarpa
Potri.015G076200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10122531-10123530 Populus trichocarpa
Potri.015G076200 2.0kb upstream 2.0kb upstream 7093 true Chr15: 10115438-10122530 Populus trichocarpa
Potri.015G076200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10115438-10117437 Populus trichocarpa
Potri.015G076200 2.0kb downstream 2.0kb downstream 7093 true Chr15: 10117438-10124530 Populus trichocarpa
Potri.015G076200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10122531-10124530 Populus trichocarpa
Potri.015G076200 5.0kb upstream 5.0kb upstream 10093 true Chr15: 10112438-10122530 Populus trichocarpa
Potri.015G076200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10112438-10117437 Populus trichocarpa
Potri.015G076200 5.0kb downstream 5.0kb downstream 10093 true Chr15: 10117438-10127530 Populus trichocarpa
Potri.015G076200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10122531-10127530 Populus trichocarpa
Potri.015G076200 10.0kb upstream 10.0kb upstream 15093 true Chr15: 10107438-10122530 Populus trichocarpa
Potri.015G076200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10107438-10117437 Populus trichocarpa
Potri.015G076200 10.0kb downstream 10.0kb downstream 15093 true Chr15: 10117438-10132530 Populus trichocarpa
Potri.015G076200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10122531-10132530 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.517     High  
cufflinks 8.889     High  
cufflinks 12.636     High  
cufflinks 9.888     High  
cufflinks 8.63     High  
cufflinks 14.834     High  
cufflinks 8.311     High  
cufflinks 8.656        
cufflinks 9.328     High  
cufflinks 8.43        
cufflinks 20.175     High High
cufflinks 8.458        
cufflinks 12.125     High  
cufflinks 8.308        
cufflinks 8.63        
cufflinks 9.339     High  
cufflinks 36.924     High High
cufflinks 9.32        
cufflinks 11.241     High  
cufflinks 3.648       Low
cufflinks 7.577        
cufflinks 4.268       Low
cufflinks 11.22     High  
cufflinks 9.29     High  
cufflinks 12.116        
cufflinks 12.63        
cufflinks 15.621       High
cufflinks 15.59       High
cufflinks 15.291        
cufflinks 15.211        

0 Strain