Gene : Potri.011G109500 P. trichocarpa v3.0
Defline:  (1 of 3) K03627 - putative transcription factor (MBF1) Genomic Order:  1095
Name:  ? Potri.011G109500 Secondary Identifier:  ? PAC:27002567
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G109500 0.5kb upstream 0.5kb upstream 2949 true Chr11: 13383957-13386905 Populus trichocarpa
Potri.011G109500 0.5kb upstream 0.5kb upstream 500 false Chr11: 13386406-13386905 Populus trichocarpa
Potri.011G109500 0.5kb downstream 0.5kb downstream 2949 true Chr11: 13383457-13386405 Populus trichocarpa
Potri.011G109500 0.5kb downstream 0.5kb downstream 500 false Chr11: 13383457-13383956 Populus trichocarpa
Potri.011G109500 1.0kb upstream 1.0kb upstream 3449 true Chr11: 13383957-13387405 Populus trichocarpa
Potri.011G109500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13386406-13387405 Populus trichocarpa
Potri.011G109500 1.0kb downstream 1.0kb downstream 3449 true Chr11: 13382957-13386405 Populus trichocarpa
Potri.011G109500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13382957-13383956 Populus trichocarpa
Potri.011G109500 2.0kb upstream 2.0kb upstream 4449 true Chr11: 13383957-13388405 Populus trichocarpa
Potri.011G109500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13386406-13388405 Populus trichocarpa
Potri.011G109500 2.0kb downstream 2.0kb downstream 4449 true Chr11: 13381957-13386405 Populus trichocarpa
Potri.011G109500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13381957-13383956 Populus trichocarpa
Potri.011G109500 5.0kb upstream 5.0kb upstream 7449 true Chr11: 13383957-13391405 Populus trichocarpa
Potri.011G109500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13386406-13391405 Populus trichocarpa
Potri.011G109500 5.0kb downstream 5.0kb downstream 7449 true Chr11: 13378957-13386405 Populus trichocarpa
Potri.011G109500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13378957-13383956 Populus trichocarpa
Potri.011G109500 10.0kb upstream 10.0kb upstream 12449 true Chr11: 13383957-13396405 Populus trichocarpa
Potri.011G109500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13386406-13396405 Populus trichocarpa
Potri.011G109500 10.0kb downstream 10.0kb downstream 12449 true Chr11: 13373957-13386405 Populus trichocarpa
Potri.011G109500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13373957-13383956 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.344     High  
cufflinks 34.718     High  
cufflinks 34.54     High  
cufflinks 32.212     High  
cufflinks 34.164     High  
cufflinks 29.738     High  
cufflinks 34.438     High  
cufflinks 38.599     High High
cufflinks 23.453     High Low
cufflinks 28.06     High  
cufflinks 28.621     High  
cufflinks 23.361     High Low
cufflinks 25.075     High  
cufflinks 27.486     High  
cufflinks 28.576     High  
cufflinks 33.02     High  
cufflinks 24.53     High Low
cufflinks 46.342     High High
cufflinks 27.501     High  
cufflinks 22.4     High Low
cufflinks 28.665     High  
cufflinks 34.872     High  
cufflinks 23.716     High Low
cufflinks 39.31     High High
cufflinks 22.757        
cufflinks 16.389        
cufflinks 22.643        
cufflinks 27.644        
cufflinks 43.398     High High
cufflinks 15.157        

0 Strain